RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MRPS25P82663 173 aaKnown RBP22.82■■□□□ 1.24
LINC01960-201ENST00000563759 TWF1Q12792 350 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 DPYSL2Q16555 572 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 CA9Q16790 459 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 EFHC2Q5JST6 749 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 RFX6Q8HWS3 928 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 RNF34Q969K3 372 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 MAGOHBQ96A72 148 aaKnown RBP22.82■■□□□ 1.24
LINC01960-201ENST00000563759 ANKZF1Q9H8Y5 726 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 PCDH18Q9HCL0 1135 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 WDR6Q9NNW5 1121 aaKnown RBP22.82■■□□□ 1.24
LINC01960-201ENST00000563759 FZD10Q9ULW2 581 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 EFR3BQ9Y2G0 817 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 IRAK3Q9Y616 596 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 IRAK2O43187 625 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 TGM5O43548 720 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 RB1P06400 928 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 SPATA31D3P0C874 917 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 DNAJB1P25685 340 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 CHRNA3P32297 505 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 ARSEP51690 589 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 AIF1P55008 147 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 DYNLT1P63172 113 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 ADCY2Q08462 1091 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 ARL13BQ3SXY8 428 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 GLE1Q53GS7 698 aaKnown RBP22.81■■□□□ 1.24
LINC01960-201ENST00000563759 SPATA31D4Q6ZUB0 917 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 PSTKQ8IV42 348 aaKnown RBP22.81■■□□□ 1.24
LINC01960-201ENST00000563759 CASP10Q92851 521 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 KLHL5Q96PQ7 755 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 TGS1Q96RS0 853 aaKnown RBP22.81■■□□□ 1.24
LINC01960-201ENST00000563759 MAK16Q9BXY0 300 aaKnown RBP22.81■■□□□ 1.24
LINC01960-201ENST00000563759 CLIC5Q9NZA1 410 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 SFMBT1Q9UHJ3 866 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 CHD9Q3L8U1 2897 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 LPXNO60711 386 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 RARGP13631 454 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 KLRC2P26717 231 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 EPHB3P54753 998 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 MMRN1Q13201 1228 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 TAZQ16635 292 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 CCDC26Q8TAB7 109 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.81■■□□□ 1.24
LINC01960-201ENST00000563759 MICAL1Q8TDZ2 1067 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 C1orf54Q8WWF1 131 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 NTAN1Q96AB6 310 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 ZNF512Q96ME7 567 aaPredicted RBP22.81■■□□□ 1.24
LINC01960-201ENST00000563759 SERPINB11Q96P15 392 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 ZNF670Q9BS34 389 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 WDCPQ9H6R7 721 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 AMACRQ9UHK6 382 aa22.81■■□□□ 1.24
LINC01960-201ENST00000563759 ATG2AQ2TAZ0 1938 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 C2orf71A6NGG8 1288 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 MSI1O43347 362 aaKnown RBP22.8■■□□□ 1.24
LINC01960-201ENST00000563759 IGLV3-25P01717 112 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 CYP1B1Q16678 543 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 TNS4Q8IZW8 715 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 C12orf50Q8NA57 414 aaPredicted RBP22.8■■□□□ 1.24
LINC01960-201ENST00000563759 PDZD8Q8NEN9 1154 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 ATG4AQ8WYN0 398 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 SAMD11Q96NU1 681 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 TMPRSS4Q9NRS4 437 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 HOMER3Q9NSC5 361 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 OLA1Q9NTK5 396 aaKnown RBP22.8■■□□□ 1.24
LINC01960-201ENST00000563759 FBXW11Q9UKB1 542 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 R3HDM2Q9Y2K5 976 aaKnown RBP22.8■■□□□ 1.24
LINC01960-201ENST00000563759 DENND4CQ5VZ89 1909 aa22.8■■□□□ 1.24
LINC01960-201ENST00000563759 HIDE1A8MVS5 230 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 RAD51CO43502 376 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 CST8O60676 142 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 L1CAMP32004 1257 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 CXCR3P49682 368 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 PLD1Q13393 1074 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 MSANTD2Q6P1R3 559 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 CCDC137Q6PK04 289 aaKnown RBP22.79■■□□□ 1.24
LINC01960-201ENST00000563759 VSIG1Q86XK7 387 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 MRPL43Q8N983 215 aaKnown RBP22.79■■□□□ 1.24
LINC01960-201ENST00000563759 HAUS1Q96CS2 278 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 KCTD15Q96SI1 283 aaPredicted RBP22.79■■□□□ 1.24
LINC01960-201ENST00000563759 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.79■■□□□ 1.24
LINC01960-201ENST00000563759 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.79■■□□□ 1.24
LINC01960-201ENST00000563759 LAMA3Q16787 3333 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 TARSL2A2RTX5 802 aaKnown RBP22.79■■□□□ 1.24
LINC01960-201ENST00000563759 GRM6O15303 877 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 GLUD1P00367 558 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 ADRA1BP35368 520 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 ARL4AP40617 200 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 SLC7A5Q01650 507 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 C10orf120Q5SQS8 335 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 BBS12Q6ZW61 710 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 MAATS1Q7Z4T9 603 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 PYROXD2Q8N2H3 581 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 FAM71BQ8TC56 605 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 OVCA2Q8WZ82 227 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 TKTL2Q9H0I9 626 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 PLEKHA4Q9H4M7 779 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 STIM2Q9P246 746 aa22.79■■□□□ 1.24
LINC01960-201ENST00000563759 HEXIM1O94992 359 aaKnown RBP22.78■■□□□ 1.24
LINC01960-201ENST00000563759 HMGA1P17096 107 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms