RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ANKRD65E5RJM6 399 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 EBAG9O00559 213 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 B4GALT3O60512 393 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 USP17L7P0C7H9 530 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 CKBP12277 381 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 YY1P25490 414 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 TUSC3Q13454 348 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 MPP2Q14168 576 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 MBTPS1Q14703 1052 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 EFTUD2Q15029 972 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMPD3-203ENST00000563226 RAB41Q5JT25 222 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 TRAF7Q6Q0C0 670 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 RTN4RL1Q86UN2 441 aaPredicted RBP19.83■□□□□ 0.77
SMPD3-203ENST00000563226 NETO2Q8NC67 525 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 MGARPQ8TDB4 240 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 PYROXD1Q8WU10 500 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 MAML1Q92585 1016 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 PRMT1Q99873 361 aaKnown RBP19.83■□□□□ 0.77
SMPD3-203ENST00000563226 PHACTR1Q9C0D0 580 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 PAK5Q9P286 719 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 NR2E3Q9Y5X4 410 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 PTCH2Q9Y6C5 1203 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 NLRC5Q86WI3 1866 aa19.83■□□□□ 0.77
SMPD3-203ENST00000563226 PIAS1O75925 651 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 PCSK1P29120 753 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 ATP5DP30049 168 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 RDXP35241 583 aaKnown RBP19.83■□□□□ 0.76
SMPD3-203ENST00000563226 RNASELQ05823 741 aaKnown RBP19.83■□□□□ 0.76
SMPD3-203ENST00000563226 LRRC14Q15048 493 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 BHLHA9Q7RTU4 235 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 IGDCC3Q8IVU1 814 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 SRRM1Q8IYB3 904 aaKnown RBP19.83■□□□□ 0.76
SMPD3-203ENST00000563226 PGBD4Q96DM1 585 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 MRRFQ96E11 262 aaKnown RBP19.83■□□□□ 0.76
SMPD3-203ENST00000563226 DTLQ9NZJ0 730 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 PTPRDP23468 1912 aa19.83■□□□□ 0.76
SMPD3-203ENST00000563226 CFAP69A5D8W1 941 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 AMHP03971 560 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 IFNAR2P48551 515 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 KCNT2Q6UVM3 1135 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 AGGF1Q8N302 714 aaeCLIP19.82■□□□□ 0.76
SMPD3-203ENST00000563226 OR10T2Q8NGX3 314 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 SMARCD1Q96GM5 515 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 ANLNQ9NQW6 1124 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 ARHGEF4Q9NR80 690 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 STAP1Q9ULZ2 295 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 CHMP2BQ9UQN3 213 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 AVILO75366 819 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 CABYRO75952 493 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 FBXO21O94952 628 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 BRAFP15056 766 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 DEUP1Q05D60 604 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 DEFB115Q30KQ5 88 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 SLC45A4Q5BKX6 768 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 INTS6LQ5JSJ4 861 aaKnown RBP19.82■□□□□ 0.76
SMPD3-203ENST00000563226 SRLQ86TD4 932 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 CDKL3Q8IVW4 592 aaPredicted RBP19.82■□□□□ 0.76
SMPD3-203ENST00000563226 PDIK1LQ8N165 341 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 SLC7A14Q8TBB6 771 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 RAET1EQ8TD07 263 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 LINC01599Q8WXQ3 324 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 RSPH1Q8WYR4 309 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 ZNF317Q96PQ6 595 aaPredicted RBP19.82■□□□□ 0.76
SMPD3-203ENST00000563226 PKMYT1Q99640 499 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 MLXIPLQ9NP71 852 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 KCNK9Q9NPC2 374 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 RABGEF1Q9UJ41 708 aa19.82■□□□□ 0.76
SMPD3-203ENST00000563226 RRP15Q9Y3B9 282 aaKnown RBP19.82■□□□□ 0.76
SMPD3-203ENST00000563226 I6L893 689 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-203ENST00000563226 M0QZQ0 153 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 CHADO15335 359 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 MFSD11O43934 449 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 CYP11A1P05108 521 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 ZFXP17010 805 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-203ENST00000563226 DRD4P21917 467 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 BDNFP23560 247 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 ARL4AP40617 200 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 FAM171BQ6P995 826 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 LRRTM3Q86VH5 581 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 ANKRD42Q8N9B4 389 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 ATP11CQ8NB49 1132 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 RNF139Q8WU17 664 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 GLT1D1Q96MS3 346 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 QKIQ96PU8 341 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMPD3-203ENST00000563226 CNGB3Q9NQW8 809 aa19.81■□□□□ 0.76
SMPD3-203ENST00000563226 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-203ENST00000563226 SMAPO00193 183 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 VAV1P15498 845 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 TADA2BQ86TJ2 420 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 TDRPQ86YL5 185 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 RIBC1Q8N443 379 aaPredicted RBP19.8■□□□□ 0.76
SMPD3-203ENST00000563226 CHMP6Q96FZ7 201 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 ACBD6Q9BR61 282 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 ETNK1Q9HBU6 452 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 CSNK1G1Q9HCP0 422 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 WDR6Q9NNW5 1121 aaKnown RBP19.8■□□□□ 0.76
SMPD3-203ENST00000563226 CREBZFQ9NS37 354 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 RASA4BC9J798 803 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 CAPN9O14815 690 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 RASA4O43374 803 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms