RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 ARHGEF19Q8IW93 802 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 SCML4Q8N228 414 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 TFAP2BQ92481 460 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 NDRG1Q92597 394 aaKnown RBP17.64■□□□□ 0.41
CLK3-210ENST00000563112 PLD4Q96BZ4 506 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 FAM81BQ96LP2 452 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 TPSD1Q9BZJ3 242 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 ARRDC1-AS1Q9H2J1 176 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 ABCC13Q9NSE7 274 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 DLL3Q9NYJ7 618 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 BCCIPQ9P287 314 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLK3-210ENST00000563112 CDV3Q9UKY7 258 aaKnown RBP17.64■□□□□ 0.41
CLK3-210ENST00000563112 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLK3-210ENST00000563112 STARD13Q9Y3M8 1113 aa17.64■□□□□ 0.41
CLK3-210ENST00000563112 EML5Q05BV3 1969 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 TRIM24O15164 1050 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 ZBTB24O43167 697 aaPredicted RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 KLKB1P03952 638 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 CYBBP04839 570 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 KRT5P13647 590 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 BRD2P25440 801 aaKnown RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 RGS7P49802 495 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 BSPRYQ5W0U4 402 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 TMEM92Q6UXU6 159 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 PRR23CQ6ZRP0 262 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 DENND1CQ8IV53 801 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 SLC35F5Q8WV83 523 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 GOLGA1Q92805 767 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 BHMTQ93088 406 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 DUSP15Q9H1R2 295 aaPredicted RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 CLSTN2Q9H4D0 955 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 UBE2TQ9NPD8 197 aaPredicted RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 AGO1Q9UL18 857 aaKnown RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 HBS1LQ9Y450 684 aaKnown RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 PCDHGA5Q9Y5G8 931 aa17.63■□□□□ 0.41
CLK3-210ENST00000563112 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.63■□□□□ 0.41
CLK3-210ENST00000563112 YJEFN3A6XGL0 299 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 E7ENQ6 273 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 DCLK1O15075 740 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 NTSR1P30989 418 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 HARS2P49590 506 aaKnown RBP17.62■□□□□ 0.41
CLK3-210ENST00000563112 MFAP3P55082 362 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 DAOAP59103 153 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 BYSLQ13895 437 aaKnown RBP17.62■□□□□ 0.41
CLK3-210ENST00000563112 PMF1Q6P1K2 205 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 ENOSF1Q7L5Y1 443 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 FMNL3Q8IVF7 1028 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 PGBD3Q8N328 593 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
CLK3-210ENST00000563112 MDGA1Q8NFP4 955 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 IRGQQ8WZA9 623 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 EDEM1Q92611 657 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 HSFY1Q96LI6 401 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 ZDHHC4Q9NPG8 344 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 PLK2Q9NYY3 685 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 INVSQ9Y283 1065 aa17.62■□□□□ 0.41
CLK3-210ENST00000563112 TCRBV21S2A2A0A5A6 115 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 MED7O43513 233 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 ADAM23O75077 832 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 FBXO21O94952 628 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 CISD3P0C7P0 127 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 CHRM1P11229 460 aaPredicted RBP17.61■□□□□ 0.41
CLK3-210ENST00000563112 MTIF2P46199 727 aaKnown RBP17.61■□□□□ 0.41
CLK3-210ENST00000563112 ZNF132P52740 706 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 GBP6Q6ZN66 633 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 BHLHA9Q7RTU4 235 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 CHPFQ8IZ52 775 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 CPXM2Q8N436 756 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 NETO1Q8TDF5 533 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 HMGB4Q8WW32 186 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 SPACA7Q96KW9 195 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 KREMEN1Q96MU8 473 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 ZSWIM1Q9BR11 485 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 RTKNQ9BST9 563 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 CRACR2AQ9BSW2 395 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 DACH1Q9UI36 760 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 CNTN6Q9UQ52 1028 aa17.61■□□□□ 0.41
CLK3-210ENST00000563112 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.6■□□□□ 0.41
CLK3-210ENST00000563112 MAP3K13O43283 966 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 PENKP01210 267 aaPredicted RBP17.6■□□□□ 0.41
CLK3-210ENST00000563112 ZNF806P0C7X5 589 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 HOXB2P14652 356 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 HNRNPLP14866 589 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLK3-210ENST00000563112 ATXN1P54253 815 aaKnown RBP17.6■□□□□ 0.41
CLK3-210ENST00000563112 E2F5Q15329 346 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 TRIP4Q15650 581 aaPredicted RBP17.6■□□□□ 0.41
CLK3-210ENST00000563112 AASDHQ4L235 1098 aaPredicted RBP17.6■□□□□ 0.41
CLK3-210ENST00000563112 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 DDI1Q8WTU0 396 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 SFMBT1Q9UHJ3 866 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
CLK3-210ENST00000563112 PRRT4C9JH25 899 aa17.59■□□□□ 0.41
CLK3-210ENST00000563112 PIK3R2O00459 728 aa17.59■□□□□ 0.41
CLK3-210ENST00000563112 SART1O43290 800 aaKnown RBP17.59■□□□□ 0.41
CLK3-210ENST00000563112 CALCAP01258 141 aa17.59■□□□□ 0.41
CLK3-210ENST00000563112 LTFP02788 710 aa17.59■□□□□ 0.41
CLK3-210ENST00000563112 MPLP40238 635 aa17.59■□□□□ 0.41
CLK3-210ENST00000563112 WASP42768 502 aa17.59■□□□□ 0.41
CLK3-210ENST00000563112 ACADSBP45954 432 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms