RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 GMIPQ9P107 970 aa8.8□□□□□ -1
CKLF-208ENST00000563092 THAP10Q9P2Z0 257 aaPredicted RBP8.8□□□□□ -1
CKLF-208ENST00000563092 SLCO1B1Q9Y6L6 691 aa8.8□□□□□ -1
CKLF-208ENST00000563092 ZNF233A6NK53 670 aa8.79□□□□□ -1
CKLF-208ENST00000563092 CYSRT1A8MQ03 144 aa8.79□□□□□ -1
CKLF-208ENST00000563092 MEI4A8MW99 385 aa8.79□□□□□ -1
CKLF-208ENST00000563092 C10orf142B7Z368 130 aa8.79□□□□□ -1
CKLF-208ENST00000563092 NEDD8-MDP1E9PL57 170 aa8.79□□□□□ -1
CKLF-208ENST00000563092 C3orf80F5H4A9 247 aa8.79□□□□□ -1
CKLF-208ENST00000563092 TLR5O60602 858 aa8.79□□□□□ -1
CKLF-208ENST00000563092 EIF5BO60841 1220 aaKnown RBP8.79□□□□□ -1
CKLF-208ENST00000563092 GCNT3O95395 438 aa8.79□□□□□ -1
CKLF-208ENST00000563092 TNNC2P02585 160 aa8.79□□□□□ -1
CKLF-208ENST00000563092 ABCG1P45844 678 aa8.79□□□□□ -1
CKLF-208ENST00000563092 DGKGP49619 791 aa8.79□□□□□ -1
CKLF-208ENST00000563092 AFF3P51826 1226 aaKnown RBP8.79□□□□□ -1
CKLF-208ENST00000563092 KIF19Q2TAC6 998 aa8.79□□□□□ -1
CKLF-208ENST00000563092 MCTP1Q6DN14 999 aa8.79□□□□□ -1
CKLF-208ENST00000563092 PCSK4Q6UW60 755 aa8.79□□□□□ -1
CKLF-208ENST00000563092 KIAA1324Q6UXG2 1013 aaKnown RBP8.79□□□□□ -1
CKLF-208ENST00000563092 FAM35AQ86V20 835 aa8.79□□□□□ -1
CKLF-208ENST00000563092 TMPRSS12Q86WS5 348 aa8.79□□□□□ -1
CKLF-208ENST00000563092 FUKQ8N0W3 1084 aa8.79□□□□□ -1
CKLF-208ENST00000563092 ZNF843Q8N446 348 aa8.79□□□□□ -1
CKLF-208ENST00000563092 ZNF276Q8N554 614 aa8.79□□□□□ -1
CKLF-208ENST00000563092 SCFD1Q8WVM8 642 aa8.79□□□□□ -1
CKLF-208ENST00000563092 EPSTI1Q96J88 318 aa8.79□□□□□ -1
CKLF-208ENST00000563092 PIWIL1Q96J94 861 aaKnown RBP8.79□□□□□ -1
CKLF-208ENST00000563092 MMS19Q96T76 1030 aa8.79□□□□□ -1
CKLF-208ENST00000563092 ORAI3Q9BRQ5 295 aa8.79□□□□□ -1
CKLF-208ENST00000563092 NUP58Q9BVL2 599 aa8.79□□□□□ -1
CKLF-208ENST00000563092 SNX25Q9H3E2 840 aa8.79□□□□□ -1
CKLF-208ENST00000563092 PCIF1Q9H4Z3 704 aa8.79□□□□□ -1
CKLF-208ENST00000563092 KIAA1586Q9HCI6 787 aa8.79□□□□□ -1
CKLF-208ENST00000563092 DMAP1Q9NPF5 467 aaPredicted RBP8.79□□□□□ -1
CKLF-208ENST00000563092 KIF3AQ9Y496 699 aa8.79□□□□□ -1
CKLF-208ENST00000563092 PCDHGA1Q9Y5H4 931 aa8.79□□□□□ -1
CKLF-208ENST00000563092 RAI2Q9Y5P3 530 aa8.79□□□□□ -1
CKLF-208ENST00000563092 COL5A1P20908 1838 aaPredicted RBP8.79□□□□□ -1
CKLF-208ENST00000563092 MGAQ8IWI9 3026 aa8.79□□□□□ -1
CKLF-208ENST00000563092 A0A1B0GVT2 93 aa8.78□□□□□ -1
CKLF-208ENST00000563092 FAM149AA5PLN7 773 aa8.78□□□□□ -1
CKLF-208ENST00000563092 TLX3O43711 291 aaPredicted RBP8.78□□□□□ -1
CKLF-208ENST00000563092 TBX18O95935 607 aa8.78□□□□□ -1
CKLF-208ENST00000563092 HLA-EP13747 358 aa8.78□□□□□ -1
CKLF-208ENST00000563092 ITPKBP27987 946 aa8.78□□□□□ -1
CKLF-208ENST00000563092 IL12RB1P42701 662 aa8.78□□□□□ -1
CKLF-208ENST00000563092 GRK6P43250 576 aa8.78□□□□□ -1
CKLF-208ENST00000563092 GRIA4P48058 902 aa8.78□□□□□ -1
CKLF-208ENST00000563092 MFAP3P55082 362 aa8.78□□□□□ -1
CKLF-208ENST00000563092 PSMD6Q15008 389 aa8.78□□□□□ -1
CKLF-208ENST00000563092 SUZ12Q15022 739 aaKnown RBP8.78□□□□□ -1
CKLF-208ENST00000563092 WDR72Q3MJ13 1102 aa8.78□□□□□ -1
CKLF-208ENST00000563092 FYB2Q5VWT5 728 aa8.78□□□□□ -1
CKLF-208ENST00000563092 TMPRSS6Q8IU80 811 aa8.78□□□□□ -1
CKLF-208ENST00000563092 SYCP3Q8IZU3 236 aa8.78□□□□□ -1
CKLF-208ENST00000563092 OR6B3Q8NGW1 331 aa8.78□□□□□ -1
CKLF-208ENST00000563092 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
CKLF-208ENST00000563092 ZNF516Q92618 1163 aa8.78□□□□□ -1
CKLF-208ENST00000563092 TATDN2Q93075 761 aa8.78□□□□□ -1
CKLF-208ENST00000563092 IGSF8Q969P0 613 aa8.78□□□□□ -1
CKLF-208ENST00000563092 SMARCD1Q96GM5 515 aa8.78□□□□□ -1
CKLF-208ENST00000563092 SMOQ99835 787 aa8.78□□□□□ -1
CKLF-208ENST00000563092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -1
CKLF-208ENST00000563092 OSER1Q9NX31 292 aa8.78□□□□□ -1
CKLF-208ENST00000563092 TBC1D7Q9P0N9 293 aa8.78□□□□□ -1
CKLF-208ENST00000563092 EIF2B4Q9UI10 523 aaKnown RBP8.78□□□□□ -1
CKLF-208ENST00000563092 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.78□□□□□ -1
CKLF-208ENST00000563092 SNX11Q9Y5W9 270 aa8.78□□□□□ -1
CKLF-208ENST00000563092 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
CKLF-208ENST00000563092 MUC22E2RYF6 1773 aaPredicted RBP8.78□□□□□ -1
CKLF-208ENST00000563092 A8MXQ7 604 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 HHLA1C9JL84 531 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 TGFB1I1O43294 461 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 TSPAN3O60637 253 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 BEST1O76090 585 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 PRPF6O94906 941 aaKnown RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 KLKB1P03952 638 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 IRF1P10914 325 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 ATICP31939 592 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 CTSKP43235 329 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 CSNK1EP49674 416 aaKnown RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 IFRD2Q12894 506 aaPredicted RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 ORC1Q13415 861 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 CAMK2GQ13555 558 aaPredicted RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 STARD3Q14849 445 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 RTP5Q14D33 572 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 EIF4HQ15056 248 aaKnown RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 SF3A1Q15459 793 aaKnown RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 GEN1Q17RS7 908 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 KCNT1Q5JUK3 1230 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 DHRS13Q6UX07 377 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 TPGS1Q6ZTW0 290 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 SV2BQ7L1I2 683 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 EPM2AIP1Q7L775 607 aaPredicted RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 PIP4K2CQ8TBX8 421 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 PRCCQ92733 491 aaPredicted RBP8.77□□□□□ -1.01
CKLF-208ENST00000563092 ERLEC1Q96DZ1 483 aa8.77□□□□□ -1.01
CKLF-208ENST00000563092 SIPA1Q96FS4 1042 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms