RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 TFR2Q9UP52 801 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 HSF2BPO75031 334 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 RTN2O75298 545 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 IGLV3-27P01718 113 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 FTLP02792 175 aaPredicted RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 RALAP11233 206 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 GZMAP12544 262 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 TCF3P15923 654 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 PFKLP17858 780 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 PSMC3P17980 439 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 SOX9P48436 509 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 GSCP56915 257 aaPredicted RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 ZNF252P-AS1Q0IIN9 211 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 TDGQ13569 410 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 C15orf59Q2T9L4 293 aaPredicted RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 GAB4Q2WGN9 574 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 DCAF6Q58WW2 860 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 NAIF1Q69YI7 327 aaPredicted RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 KLHDC10Q6PID8 442 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 RAD9BQ6WBX8 426 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 Q6ZNB5 142 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 RSRC2Q7L4I2 434 aaKnown RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 CNGA4Q8IV77 575 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 BBS7Q8IWZ6 715 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 DRC7Q8IY82 874 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 ARHGAP18Q8N392 663 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 FCRL2Q96LA5 508 aaPredicted RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 NPY6RQ99463 290 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 NHEJ1Q9H9Q4 299 aaPredicted RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 POPDC2Q9HBU9 364 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 TMPRSS4Q9NRS4 437 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 OBP2AQ9NY56 170 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 GTSE1Q9NYZ3 720 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 XPO7Q9UIA9 1087 aaKnown RBP10.22□□□□□ -0.77
CLK3-208ENST00000562626 ZMYM5Q9UJ78 669 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 DNMT3LQ9UJW3 386 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 DUSP12Q9UNI6 340 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 SORCS3Q9UPU3 1222 aa10.22□□□□□ -0.77
CLK3-208ENST00000562626 SYNJ2BP-COX16A0A087WUM0 186 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 SSU72P8A0A1W2PR75 194 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 ANTXRLA6NF34 631 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 C2CD4BA6NLJ0 364 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 IRAK2O43187 625 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 TRUB2O95900 331 aaKnown RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 PDGFBP01127 241 aaPredicted RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 GLI1P08151 1106 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 ABCB4P21439 1286 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 RFC1P35251 1148 aaPredicted RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 SCNN1AP37088 669 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 GALCP54803 685 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 VCPP55072 806 aaKnown RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 CDK17Q00537 523 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 EML3Q32P44 896 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 EFHC1Q5JVL4 640 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 CCDC122Q5T0U0 273 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 DAB2IPQ5VWQ8 1189 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 PLEKHA7Q6IQ23 1121 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 TOGARAM2Q6ZUX3 1019 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 BNIPLQ7Z465 357 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 CPNE8Q86YQ8 564 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 C3orf20Q8ND61 904 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 RNF139Q8WU17 664 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 RXFP2Q8WXD0 754 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 NT5C3BQ969T7 300 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 ZNF653Q96CK0 615 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 MYEOVQ96EZ4 313 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 SLC39A13Q96H72 371 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 CFAP57Q96MR6 1250 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 TBCBQ99426 244 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 TRMT61BQ9BVS5 477 aaKnown RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 MAGEB5Q9BZ81 275 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 NACA2Q9H009 215 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 THAP2Q9H0W7 228 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 EBF3Q9H4W6 596 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 EPHX3Q9H6B9 360 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 KIF9Q9HAQ2 790 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 PIGVQ9NUD9 493 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 COX16Q9P0S2 106 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 MYO1AQ9UBC5 1043 aa10.21□□□□□ -0.77
CLK3-208ENST00000562626 REXO2Q9Y3B8 237 aaKnown RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 BZW2Q9Y6E2 419 aaKnown RBP10.21□□□□□ -0.77
CLK3-208ENST00000562626 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.78
CLK3-208ENST00000562626 A0A0U1RQJ8 604 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 GOLGA6L7A0A1B0GV03 622 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 KRBA1A5PL33 1030 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SIGLEC16A6NMB1 481 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 DPYSL4O14531 572 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 CHADO15335 359 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SART1O43290 800 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 CYP17A1P05093 508 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 CALB1P05937 261 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 TPM1P09493 284 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SRFP11831 508 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 CORO1AP31146 461 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 SLC6A4P31645 630 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 NOS2P35228 1153 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms