RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 COG7P83436 770 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 SATB1Q01826 763 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 MSANTD2Q6P1R3 559 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 TMEM110Q86TL2 294 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 SFTPA1Q8IWL2 248 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 P2RY11Q96G91 374 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 PIWIL1Q96J94 861 aaKnown RBP16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 ERGIC2Q96RQ1 377 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 IER2Q9BTL4 223 aa16.08■□□□□ 0.16
CCNDBP1-203ENST00000562553 FAM170AA1A519 330 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 TEX33O43247 280 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 HOXC11O43248 304 aaPredicted RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 RNF40O75150 1001 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 KRT9P35527 623 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 JAM2P57087 298 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 BPIFB4P59827 614 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 CSTF1Q05048 431 aaKnown RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 GAD2Q05329 585 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 KDSRQ06136 332 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 ANO4Q32M45 955 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 NOP9Q86U38 636 aaKnown RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 SYNPOQ8N3V7 929 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 SPEM1Q8N4L4 309 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 NAT16Q8N8M0 369 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 DDX1Q92499 740 aaKnown RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 FAM149B1Q96BN6 582 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 PCMTD1Q96MG8 357 aaPredicted RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 CBX8Q9HC52 389 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 POLR3BQ9NW08 1133 aaPredicted RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 FBXO4Q9UKT5 387 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 AGO1Q9UL18 857 aaKnown RBP16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 FRYLO94915 3013 aa16.07■□□□□ 0.16
CCNDBP1-203ENST00000562553 GVINP1Q7Z2Y8 2422 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 TRIM24O15164 1050 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 GFPT2O94808 682 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 ERBB2P04626 1255 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 TDGF1P13385 188 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 TAF5Q15542 800 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 TRIP4Q15650 581 aaPredicted RBP16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 ZSCAN23Q3MJ62 389 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 NEK11Q8NG66 645 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 EPS8L1Q8TE68 723 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 PLD4Q96BZ4 506 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 PPP1R13BQ96KQ4 1090 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 NAALADL1Q9UQQ1 740 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 R4GN57 208 aa16.06■□□□□ 0.16
CCNDBP1-203ENST00000562553 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 K7EQS6 105 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 SART1O43290 800 aaKnown RBP16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 TULP3O75386 442 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 MMEP08473 750 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 NCAM1P13591 858 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 SOX5P35711 763 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 EIF2DP41214 584 aaKnown RBP16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 CXCL12P48061 93 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 CCR3P51677 355 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 ZNF528Q3MIS6 628 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 ZC3H14Q6PJT7 736 aaKnown RBP16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 FAM183BPQ6ZVS7 135 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 LUZP1Q86V48 1076 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 DQX1Q8TE96 717 aaKnown RBP16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 SLC20A1Q8WUM9 679 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 BHMTQ93088 406 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 EXOC4Q96A65 974 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 PNKPQ96T60 521 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 DCLK3Q9C098 648 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 PLK2Q9NYY3 685 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 MARK1Q9P0L2 795 aa16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
CCNDBP1-203ENST00000562553 K7ESF4 209 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 KAT7O95251 611 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 IGLV3-27P01718 113 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 CHRM1P11229 460 aaPredicted RBP16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 TYRP14679 529 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 CDH5P33151 784 aaPredicted RBP16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 SEC13P55735 322 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 PITX1P78337 314 aaPredicted RBP16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 SKOR2Q2VWA4 1001 aaPredicted RBP16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 FBXO43Q4G163 708 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 TAC4Q86UU9 113 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 RPLP0P6Q8NHW5 317 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 ADAM32Q8TC27 787 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 NAP1L5Q96NT1 182 aaPredicted RBP16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 SPAG5Q96R06 1193 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
CCNDBP1-203ENST00000562553 ARHGEF4Q9NR80 690 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms