RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.46■□□□□ 0.393e-8■■■□□ 18.9
CLK3-207ENST00000562389 TRIOO75962 3097 aa17.46■□□□□ 0.38
CLK3-207ENST00000562389 MYOFQ9NZM1 2061 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 CAPN9O14815 690 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 HMBSP08397 361 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 CD72P21854 359 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 TARSP26639 723 aaKnown RBP17.45■□□□□ 0.38
CLK3-207ENST00000562389 CORO1AP31146 461 aaKnown RBP17.45■□□□□ 0.38
CLK3-207ENST00000562389 GJA4P35212 333 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 CENPCQ03188 943 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 UBXN2BQ14CS0 331 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 DHCR24Q15392 516 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 TAF5Q15542 800 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 CLEC16AQ2KHT3 1053 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
CLK3-207ENST00000562389 TXNDC11Q6PKC3 985 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 XYLT1Q86Y38 959 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 CCDC105Q8IYK2 499 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 DQX1Q8TE96 717 aaKnown RBP17.45■□□□□ 0.38
CLK3-207ENST00000562389 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 CAPN11Q9UMQ6 739 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 SIT1Q9Y3P8 196 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 F5P12259 2224 aa17.45■□□□□ 0.38
CLK3-207ENST00000562389 KIAA1549LQ6ZVL6 1849 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 ZNF318Q5VUA4 2279 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 MSI1O43347 362 aaKnown RBP17.44■□□□□ 0.38
CLK3-207ENST00000562389 DAB1O75553 588 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 ADH1CP00326 375 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 IGLV3-27P01718 113 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 KLKB1P03952 638 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 GYPCP04921 128 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 MMP8P22894 467 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 AVPR2P30518 371 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 VCPP55072 806 aaKnown RBP17.44■□□□□ 0.38
CLK3-207ENST00000562389 ZBED6P86452 979 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 RING1Q06587 406 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 SYPL2Q5VXT5 272 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 RHBDF2Q6PJF5 856 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 ZNF687Q8N1G0 1237 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 TMEM105Q8N8V8 129 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 OLIG1Q8TAK6 271 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 SYN2Q92777 582 aaPredicted RBP17.44■□□□□ 0.38
CLK3-207ENST00000562389 RBSNQ9H1K0 784 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 HAUS4Q9H6D7 363 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 SPHK2Q9NRA0 654 aa17.44■□□□□ 0.38
CLK3-207ENST00000562389 MTF2Q9Y483 593 aaPredicted RBP17.44■□□□□ 0.38
CLK3-207ENST00000562389 FAM170BA6NMN3 283 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 TRDMT1O14717 391 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 NCAM2O15394 837 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 PI15O43692 258 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 LATS1O95835 1130 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 IGLV3-25P01717 112 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 ADH5P11766 374 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 HARS2P49590 506 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 GSCP56915 257 aaPredicted RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 KLHL30Q0D2K2 578 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 TRIM14Q14142 442 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 GAB4Q2WGN9 574 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 LY6G5CQ5SRR4 150 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 MMS22LQ6ZRQ5 1243 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 TAC4Q86UU9 113 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 GAS2L3Q86XJ1 694 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 PHF13Q86YI8 300 aaPredicted RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 VSTM4Q8IW00 320 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 DEFB106AQ8N104 65 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 SLC30A5Q8TAD4 765 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 EXOC4Q96A65 974 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 SEPT11Q9NVA2 429 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 AGO1Q9UL18 857 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 NDRG2Q9UN36 371 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 TLR6Q9Y2C9 796 aa17.43■□□□□ 0.38
CLK3-207ENST00000562389 LUC7L2Q9Y383 392 aaKnown RBP17.43■□□□□ 0.38
CLK3-207ENST00000562389 IRAK2O43187 625 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 HOXC11O43248 304 aaPredicted RBP17.42■□□□□ 0.38
CLK3-207ENST00000562389 GRAP2O75791 330 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 TRUB2O95900 331 aaKnown RBP17.42■□□□□ 0.38
CLK3-207ENST00000562389 TNFAIP3P21580 790 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 NOS2P35228 1153 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 MAGEA9P43362 315 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 NUBP1P53384 320 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 TBX4P57082 545 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 GAD2Q05329 585 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 PTP4A2Q12974 167 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 FZD5Q13467 585 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 PON2Q15165 354 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 C2CD6Q53TS8 623 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 DCAF6Q58WW2 860 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 TMEM196Q5HYL7 178 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 FAM102AQ5T9C2 384 aaPredicted RBP17.42■□□□□ 0.38
CLK3-207ENST00000562389 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 PPP1R2P3Q6NXS1 205 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 DENND1CQ8IV53 801 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 UNC45BQ8IWX7 931 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 FAM217AQ8IXS0 508 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 CPXM2Q8N436 756 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 CPLX3Q8WVH0 158 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 CLDN23Q96B33 292 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms