RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 EIF4A3P38919 411 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 MRE11P49959 708 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 NOMO3P69849 1222 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 KRT83P78385 493 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 CENPCQ03188 943 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 MLF2Q15773 248 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 MPPE1Q53F39 396 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 SCYL2Q6P3W7 929 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 ALKBH5Q6P6C2 394 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TPRG1Q6ZUI0 275 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 H2AFVQ71UI9 128 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 SLC26A9Q7LBE3 791 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 PHLDB2Q86SQ0 1253 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TMEM150AQ86TG1 271 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 RALGPS2Q86X27 583 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 PHF13Q86YI8 300 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 TMTC1Q8IUR5 882 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TTC8Q8TAM2 541 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 UCMAQ8WVF2 138 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 KLF16Q9BXK1 252 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 EBF3Q9H4W6 596 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 ARHGEF3Q9NR81 526 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 METTL5Q9NRN9 209 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 TMEM30AQ9NV96 361 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 DONSONQ9NYP3 566 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 CNOT8Q9UFF9 292 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 NAALADL1Q9UQQ1 740 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TLR6Q9Y2C9 796 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 WNT6Q9Y6F9 365 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 PIAS3Q9Y6X2 628 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 SCN1AP35498 2009 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TMEM221A6NGB7 291 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 F5H5T6 163 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 M0R296 226 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 MYO1FO00160 1098 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 MDM4O15151 490 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 DAPK3O43293 454 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 PRAMEF12O95522 483 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 LATS1O95835 1130 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 APODP05090 189 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 ADH5P11766 374 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 GPD1P21695 349 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 PSMA2P25787 234 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 CDC25BP30305 580 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 RDXP35241 583 aaKnown RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 PBX1P40424 430 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 NOP2P46087 812 aaKnown RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 GABRB2P47870 512 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 OXCT1P55809 520 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 FCHO2Q0JRZ9 810 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 NNTQ13423 1086 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 HADHQ16836 314 aaKnown RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 PTPN20Q4JDL3 420 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 TMEM31Q5JXX7 168 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 TPGS1Q6ZTW0 290 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 ZNF571Q7Z3V5 609 aaPredicted RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 KIAA1328Q86T90 577 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 GAS2L3Q86XJ1 694 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 CCDC170Q8IYT3 715 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 MCOLN2Q8IZK6 566 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 WDTC1Q8N5D0 677 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 C3orf20Q8ND61 904 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 DDX1Q92499 740 aaKnown RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 BTN2A3PQ96KV6 586 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 ZSWIM1Q9BR11 485 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 BBS2Q9BXC9 721 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 ECT2Q9H8V3 914 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 NHEJ1Q9H9Q4 299 aaPredicted RBP11.15□□□□□ -0.62
TPM1-229ENST00000561242 GRPEL1Q9HAV7 217 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 TRPV5Q9NQA5 729 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 CTTNBP2NLQ9P2B4 639 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 DEC1Q9P2X7 70 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 SLC8A2Q9UPR5 921 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 TRIP11Q15643 1979 aa11.15□□□□□ -0.62
TPM1-229ENST00000561242 TBC1D3BA6NDS4 549 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 SIGLEC16A6NMB1 481 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 FAM170BA6NMN3 283 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 PI4K2BG5E9Z4 385 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 IRAK2O43187 625 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 ATG13O75143 517 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 TADA3O75528 432 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 UNGP13051 313 aaPredicted RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 MAGEA1P43355 309 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 RPL34P49207 117 aaKnown RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 MLLT6P55198 1093 aaPredicted RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 ATP11AP98196 1134 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 RING1Q06587 406 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 USP4Q13107 963 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 ZNF77Q15935 545 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 IFI16Q16666 785 aaKnown RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 CDO1Q16878 200 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 SLC25A52Q3SY17 297 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms