RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPL28-209ENST00000560055 KANSL1LA0AUZ9 987 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 SLC12A8A0AV02 714 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 SPECC1L-ADORA2AF8WAN1 911 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 NFATC1O95644 943 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 IGLV3-25P01717 112 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 IGLV3-27P01718 113 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 PTP4A2Q12974 167 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 NNTQ13423 1086 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 GAB4Q2WGN9 574 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 C2CD6Q53TS8 623 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 HGSNATQ68CP4 663 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 MMS22LQ6ZRQ5 1243 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 ZNF571Q7Z3V5 609 aaPredicted RBP17.57■□□□□ 0.4
RPL28-209ENST00000560055 RALGPS2Q86X27 583 aaPredicted RBP17.57■□□□□ 0.4
RPL28-209ENST00000560055 PHF13Q86YI8 300 aaPredicted RBP17.57■□□□□ 0.4
RPL28-209ENST00000560055 CPA6Q8N4T0 437 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 MSANTD4Q8NCY6 345 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 PRSS33Q8NF86 280 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 SLC30A5Q8TAD4 765 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 TTC8Q8TAM2 541 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 PLD4Q96BZ4 506 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 MFSD1Q9H3U5 465 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 HAUS4Q9H6D7 363 aa17.57■□□□□ 0.4
RPL28-209ENST00000560055 LSM7Q9UK45 103 aaKnown RBP17.57■□□□□ 0.4
RPL28-209ENST00000560055 LUC7L2Q9Y383 392 aaKnown RBP17.57■□□□□ 0.4
RPL28-209ENST00000560055 MAN2B1O00754 1011 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 MSI1O43347 362 aaKnown RBP17.56■□□□□ 0.4
RPL28-209ENST00000560055 CYP17A1P05093 508 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 HMBSP08397 361 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 CD72P21854 359 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 CASP14P31944 242 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 GJA4P35212 333 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 CLCN5P51795 746 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 KPNA1P52294 538 aaPredicted RBP17.56■□□□□ 0.4
RPL28-209ENST00000560055 GSCP56915 257 aaPredicted RBP17.56■□□□□ 0.4
RPL28-209ENST00000560055 NHLH1Q02575 133 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 EIF4EBP2Q13542 120 aaPredicted RBP17.56■□□□□ 0.4
RPL28-209ENST00000560055 TRIM14Q14142 442 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 RHBDF2Q6PJF5 856 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 TXNDC11Q6PKC3 985 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 ZNF852Q6ZMS4 543 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 SUGP1Q8IWZ8 645 aaKnown RBP17.56■□□□□ 0.4
RPL28-209ENST00000560055 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 FOXQ1Q9C009 403 aa17.56■□□□□ 0.4
RPL28-209ENST00000560055 FAM170AA1A519 330 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 CAPN9O14815 690 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 DAB1O75553 588 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 GRAP2O75791 330 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 AOC1P19801 751 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 TARSP26639 723 aaKnown RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 CORO1AP31146 461 aaKnown RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 HNRNPH3P31942 346 aaKnown RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 NSFP46459 744 aaKnown RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 PITX1P78337 314 aaPredicted RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 RING1Q06587 406 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 KLHL30Q0D2K2 578 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 ARID5BQ14865 1188 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 DHCR24Q15392 516 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 DCAF6Q58WW2 860 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 ASTLQ6HA08 431 aaPredicted RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 MON1BQ7L1V2 547 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 TAC4Q86UU9 113 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 FAM217AQ8IXS0 508 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 DEFB106AQ8N104 65 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 FLCNQ8NFG4 579 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 PJA1Q8NG27 643 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 SLC39A13Q96H72 371 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 SERPINB11Q96P15 392 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 C11orf70Q9BRQ4 267 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 TRIM5Q9C035 493 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 DCLK3Q9C098 648 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 LTB4R2Q9NPC1 389 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 TMEM59LQ9UK28 342 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 AGO1Q9UL18 857 aaKnown RBP17.55■□□□□ 0.4
RPL28-209ENST00000560055 ZNF510Q9Y2H8 683 aa17.55■□□□□ 0.4
RPL28-209ENST00000560055 DDX3XO00571 662 aaKnown RBP eCLIP17.54■□□□□ 0.41e-24■■■□□ 17
RPL28-209ENST00000560055 IRAK2O43187 625 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 SKILP12757 684 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 NR1H3Q13133 447 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 FZD5Q13467 585 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 FAM102AQ5T9C2 384 aaPredicted RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 ACAD10Q6JQN1 1059 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 ARCQ7LC44 396 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 ALYREFQ86V81 257 aaKnown RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 CCDC105Q8IYK2 499 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 ADAM32Q8TC27 787 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 FAM3CQ92520 227 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 NT5C3BQ969T7 300 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 FCRL2Q96LA5 508 aaPredicted RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 NELL2Q99435 816 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 KCNH6Q9H252 994 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 ADAM22Q9P0K1 906 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 STOML2Q9UJZ1 356 aa17.54■□□□□ 0.4
RPL28-209ENST00000560055 TLR6Q9Y2C9 796 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms