RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GCNAQ96QF7 691 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 CYP2S1Q96SQ9 504 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 SELENOOQ9BVL4 669 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 NUP85Q9BW27 656 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 PHF7Q9BWX1 381 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 C1QTNF1Q9BXJ1 281 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 KCND1Q9NSA2 647 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 OBP2AQ9NY56 170 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 RAPGEFL1Q9UHV5 662 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 TFR2Q9UP52 801 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 HBS1LQ9Y450 684 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 PRAMEF12O95522 483 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 TRUB2O95900 331 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 ABL1P00519 1130 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 HDCP19113 662 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 KCNQ1P51787 676 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 USP4Q13107 963 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 ACAP1Q15027 740 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 SKIV2LQ15477 1246 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 TRIP4Q15650 581 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 HS1BP3Q53T59 392 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 DCAF6Q58WW2 860 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 FAM78AQ5JUQ0 283 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 PTCRAQ6ISU1 281 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 GET4Q7L5D6 327 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 TADA2BQ86TJ2 420 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 TAC4Q86UU9 113 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 SLC35G2Q8TBE7 412 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 ZNF564Q8TBZ8 553 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 ING5Q8WYH8 240 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 GOLGA1Q92805 767 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 SMARCD2Q92925 531 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 USP13Q92995 863 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 RSPRY1Q96DX4 576 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 LRRC3BQ96PB8 259 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 OSGEPQ9NPF4 335 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 DNMT3LQ9UJW3 386 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 STOML2Q9UJZ1 356 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 NUDT5Q9UKK9 219 aa15.45■□□□□ 0.06
SNRPA1-207ENST00000559309 COL4A2P08572 1712 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 TRAV19A0A0A6YYK7 116 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 LOC730098B7Z3J9 87 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 I6L893 689 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 GFRA2O00451 464 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 MDM4O15151 490 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 PDGFRAP16234 1089 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 GPD1P21695 349 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 PLA2G5P39877 138 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 CXCR3P49682 368 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 HDAC4P56524 1084 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 ZNF77Q15935 545 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 Q6ZNB5 142 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 CYP4V2Q6ZWL3 525 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 OTOP3Q7RTS5 596 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 REXO1L1PQ8IX06 675 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 ZDHHC14Q8IZN3 488 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 ZSCAN18Q8TBC5 510 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 WBP2Q969T9 261 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 AZIN2Q96A70 460 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 FCRL2Q96LA5 508 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 CFAP57Q96MR6 1250 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 SERPINB11Q96P15 392 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 TBCBQ99426 244 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 TDP1Q9NUW8 608 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 MARCH2Q9P0N8 246 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 MYO1AQ9UBC5 1043 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 LCMT1Q9UIC8 334 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 STAP1Q9ULZ2 295 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 CCL26Q9Y258 94 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 TLR6Q9Y2C9 796 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 DUSP10Q9Y6W6 482 aa15.44■□□□□ 0.06
SNRPA1-207ENST00000559309 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 KCNU1A8MYU2 1149 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 CCP110O43303 1012 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 NRDCO43847 1150 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 IPO7O95373 1038 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 PTMAP06454 111 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 CCDC175P0C221 793 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 IL9P15248 144 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 MAN1A1P33908 653 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 COG7P83436 770 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 EFEMP1Q12805 493 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 C15orf59Q2T9L4 293 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 RAB6CQ53S08 254 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 SH3PXD2AQ5TCZ1 1133 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 HTR3DQ70Z44 454 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 FAM217AQ8IXS0 508 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 RNF139Q8WU17 664 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 RAB6CQ9H0N0 254 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 PIGVQ9NUD9 493 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 PRKAG3Q9UGI9 489 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 SFMBT1Q9UHJ3 866 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms