RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BBS7Q8IWZ6 715 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 ARHGAP18Q8N392 663 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 TTC8Q8TAM2 541 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 BPIFB1Q8TDL5 484 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 NT5C3BQ969T7 300 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 SLC39A13Q96H72 371 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 FCRL2Q96LA5 508 aaPredicted RBP11.38□□□□□ -0.59
TPM1-217ENST00000559108 TBCBQ99426 244 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 FAM83CQ9BQN1 747 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.38□□□□□ -0.59
TPM1-217ENST00000559108 THAP2Q9H0W7 228 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 POPDC2Q9HBU9 364 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 TMPRSS4Q9NRS4 437 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 DNMT3LQ9UJW3 386 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 BZW2Q9Y6E2 419 aaKnown RBP11.38□□□□□ -0.59
TPM1-217ENST00000559108 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 C2CD4BA6NLJ0 364 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 IRAK2O43187 625 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 HSF2BPO75031 334 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 RTN2O75298 545 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 TRUB2O95900 331 aaKnown RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 RALAP11233 206 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 PSMC3P17980 439 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 ABCB4P21439 1286 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 GDI1P31150 447 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 SOX9P48436 509 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 GALCP54803 685 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 VCPP55072 806 aaKnown RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 MAMLD1Q13495 774 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 TDGQ13569 410 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 TRIP4Q15650 581 aaPredicted RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 C15orf59Q2T9L4 293 aaPredicted RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 EML3Q32P44 896 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 CCDC14Q49A88 953 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 EFHC1Q5JVL4 640 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 CCDC122Q5T0U0 273 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 DAB2IPQ5VWQ8 1189 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 NADSYN1Q6IA69 706 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 PLEKHA7Q6IQ23 1121 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 MTSS1LQ765P7 747 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 RSRC2Q7L4I2 434 aaKnown RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 BEND5Q7L4P6 421 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 ARFGAP1Q8N6T3 406 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 RXFP2Q8WXD0 754 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 ZNF653Q96CK0 615 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 CFAP57Q96MR6 1250 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 MCEEQ96PE7 176 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 MAGEB5Q9BZ81 275 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 KIF9Q9HAQ2 790 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 PIGVQ9NUD9 493 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 OBP2AQ9NY56 170 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 GTSE1Q9NYZ3 720 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 CNOT8Q9UFF9 292 aaKnown RBP11.37□□□□□ -0.59
TPM1-217ENST00000559108 DUSP12Q9UNI6 340 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 SORCS3Q9UPU3 1222 aa11.37□□□□□ -0.59
TPM1-217ENST00000559108 DOCK4Q8N1I0 1966 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 SYNJ2BP-COX16A0A087WUM0 186 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 KRBA1A5PL33 1030 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 RCCD1A6NED2 376 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 GFRA2O00451 464 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 SART1O43290 800 aaKnown RBP11.36□□□□□ -0.59
TPM1-217ENST00000559108 PDGFBP01127 241 aaPredicted RBP11.36□□□□□ -0.59
TPM1-217ENST00000559108 CALB1P05937 261 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 GLI1P08151 1106 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 SLC6A4P31645 630 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 MATKP42679 507 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 SGSHP51688 502 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 MESP2Q0VG99 397 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 GSE1Q14687 1217 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 ZDHHC17Q8IUH5 632 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 OSCP1Q8WVF1 389 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 DDX23Q9BUQ8 820 aaKnown RBP11.36□□□□□ -0.59
TPM1-217ENST00000559108 NACA2Q9H009 215 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 EBF3Q9H4W6 596 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 COX16Q9P0S2 106 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 IMPACTQ9P2X3 320 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 AGO1Q9UL18 857 aaKnown RBP11.36□□□□□ -0.59
TPM1-217ENST00000559108 SNX10Q9Y5X0 201 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
TPM1-217ENST00000559108 A0A0C4DFX4 3053 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 TMEM191CA6NGB0 347 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 SIGLEC16A6NMB1 481 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 CHADO15335 359 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 CCP110O43303 1012 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 LCA5LO95447 670 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 CYP17A1P05093 508 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 CYP1A2P05177 515 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 TPM1P09493 284 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 SRFP11831 508 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 TCF4P15884 667 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 CORO1AP31146 461 aaKnown RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 NOS2P35228 1153 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 GGCXP38435 758 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms