RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 CNPY3Q9BT09 278 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC46A2Q9BY10 475 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 KIF9Q9HAQ2 790 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 OSGEPQ9NPF4 335 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TMEM51Q9NW97 253 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 DDIT4Q9NX09 232 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SMPD4Q9NXE4 827 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 IP6K2Q9UHH9 426 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SFMBT1Q9UHJ3 866 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 LSM7Q9UK45 103 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PYCARDQ9ULZ3 195 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 USTQ9Y2C2 406 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 HBS1LQ9Y450 684 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 NR2E1Q9Y466 385 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PAXBP1Q9Y5B6 917 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 CPQQ9Y646 472 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ZFP37Q9Y6Q3 630 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 MYO16Q9Y6X6 1858 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 GOLGA6L9A6NEM1 432 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 IRAK2O43187 625 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 RNF8O76064 485 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 MTA2O94776 668 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 OLFM2O95897 454 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 F9P00740 461 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 APOEP02649 317 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 FYNP06241 537 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 HMBSP08397 361 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC2A3P11169 496 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SP100P23497 879 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 ARHGAP25P42331 645 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SSR1P43307 286 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 HARS2P49590 506 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 PITX1P78337 314 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TFF2Q03403 129 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 NNTQ13423 1086 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 PIGHQ14442 188 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 MESDQ14696 234 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TCEAL1Q15170 157 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TRIP4Q15650 581 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SMAD2Q15796 467 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 C15orf59Q2T9L4 293 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 CCDC14Q49A88 953 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 HS1BP3Q53T59 392 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 FAM78AQ5JUQ0 283 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TRNP1Q6NT89 227 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SCYL2Q6P3W7 929 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 STRADAQ7RTN6 431 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 ARID3BQ8IVW6 561 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 UNC45BQ8IWX7 931 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 CELF5Q8N6W0 485 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 ALS2CR12Q96Q35 445 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC22A12Q96S37 553 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 MYADMQ96S97 322 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 CYP2S1Q96SQ9 504 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 NPY6RQ99463 290 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 NCAPGQ9BPX3 1015 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 PHF7Q9BWX1 381 aaPredicted RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TRIM7Q9C029 511 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 RNF38Q9H0F5 515 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 LZTFL1Q9NQ48 299 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 PRDM6Q9NQX0 595 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TDP1Q9NUW8 608 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 CFAP97Q9P2B7 532 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC12A6Q9UHW9 1150 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 GUCA1BQ9UMX6 200 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 ARHGAP26Q9UNA1 814 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 TLR6Q9Y2C9 796 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 SH3BP1Q9Y3L3 701 aa6.87□□□□□ -1.31
CHRNA3-204ENST00000559002 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 C2CD4DB7Z1M9 353 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 LEFTY2O00292 366 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 SPOPO43791 374 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PRPSAP2O60256 369 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PROSCO94903 275 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 MOCS3O95396 460 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PRAMEF12O95522 483 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 MOCS2O96007 188 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 IGLV3-25P01717 112 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 LAMP2P13473 410 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 TFE3P19532 575 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 WEE1P30291 646 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 CCR1P32246 355 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 MAN1A1P33908 653 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 DEKP35659 375 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 GJC1P36383 396 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC1A1P43005 524 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 HADHBP55084 474 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 OGDHQ02218 1023 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 RING1Q06587 406 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF252P-AS1Q0IIN9 211 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 USP4Q13107 963 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 MTA1Q13330 715 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms