RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 ACSS3Q9H6R3 686 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 UGT1A7Q9HAW7 530 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 UGT1A10Q9HAW8 530 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 UGT1A8Q9HAW9 530 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ANLNQ9NQW6 1124 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 DTLQ9NZJ0 730 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 SEPT10Q9P0V9 454 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 INPP5FQ9Y2H2 1132 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 MAD1L1Q9Y6D9 718 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 YJEFN3A6XGL0 299 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 CXorf49A8MYA2 514 aaPredicted RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 E7ENQ6 273 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 E7ESA3 106 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ASMTLO95671 621 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 GHRP10912 638 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 TGM2P21980 687 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 CD52P31358 61 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 PTPN9P43378 593 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 FLT3LGP49771 235 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 IFRD2Q12894 506 aaPredicted RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.656e-6■■■■■ 34.5
CUX1-217ENST00000558836 NCBP2-AS2Q69YL0 99 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 DSTYKQ6XUX3 929 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 DENND5BQ6ZUT9 1274 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 CAND1Q86VP6 1230 aaKnown RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 ZDHHC17Q8IUH5 632 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 SIX6OS1Q8N1H7 587 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
CUX1-217ENST00000558836 TEKT4Q8WW24 435 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 CENPIQ92674 756 aaPredicted RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 PCED1BQ96HM7 432 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 RMDN2Q96LZ7 410 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ZNF670Q9BS34 389 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 PITPNM3Q9BZ71 974 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ULBP1Q9BZM6 244 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ZFYVE28Q9HCC9 887 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 PIGVQ9NUD9 493 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 HAUS2Q9NVX0 235 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 SLC17A7Q9P2U7 560 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 TEX264Q9Y6I9 313 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 FAM72CH0Y354 149 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 XPO1O14980 1071 aaKnown RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 THP07101 528 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 ADRA1DP25100 572 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 SNX16P57768 344 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 MRPS5P82675 430 aaKnown RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 IL9RQ01113 521 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 FAAP100Q0VG06 881 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 AP1B1Q10567 949 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 OLIG2Q13516 323 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 FAM72AQ5TYM5 149 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 OTUD1Q5VV17 481 aaPredicted RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 FAM72DQ6L9T8 149 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 TRPM8Q7Z2W7 1104 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 FAM72BQ86X60 149 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 UNC5BQ8IZJ1 945 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 NME8Q8N427 588 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 PPM1NQ8N819 430 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 CCDC63Q8NA47 563 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 CCNYQ8ND76 341 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 DCAKDQ8WVC6 231 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 MAGEB18Q96M61 343 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 HNRNPABQ99729 332 aaKnown RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 NSRP1Q9H0G5 558 aaKnown RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 PAK5Q9P286 719 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 USP15Q9Y4E8 981 aaPredicted RBP11.01□□□□□ -0.65
CUX1-217ENST00000558836 SNX10Q9Y5X0 201 aa11.01□□□□□ -0.65
CUX1-217ENST00000558836 I6L893 689 aaPredicted RBP11□□□□□ -0.65
CUX1-217ENST00000558836 CAPN9O14815 690 aa11□□□□□ -0.65
CUX1-217ENST00000558836 MFSD11O43934 449 aa11□□□□□ -0.65
CUX1-217ENST00000558836 MGEA5O60502 916 aa11□□□□□ -0.65
CUX1-217ENST00000558836 DUSP11O75319 330 aaKnown RBP11□□□□□ -0.65
CUX1-217ENST00000558836 AP1G2O75843 785 aa11□□□□□ -0.65
CUX1-217ENST00000558836 VAV1P15498 845 aa11□□□□□ -0.65
CUX1-217ENST00000558836 SLC8A3P57103 927 aa11□□□□□ -0.65
CUX1-217ENST00000558836 RALGAPA2Q2PPJ7 1873 aa11□□□□□ -0.65
CUX1-217ENST00000558836 SLC25A52Q3SY17 297 aa11□□□□□ -0.65
CUX1-217ENST00000558836 TAF2Q6P1X5 1199 aa11□□□□□ -0.65
CUX1-217ENST00000558836 PPP1R21Q6ZMI0 780 aa11□□□□□ -0.65
CUX1-217ENST00000558836 AGMOQ6ZNB7 445 aa11□□□□□ -0.65
CUX1-217ENST00000558836 TDRPQ86YL5 185 aa11□□□□□ -0.65
CUX1-217ENST00000558836 RIBC1Q8N443 379 aaPredicted RBP11□□□□□ -0.65
CUX1-217ENST00000558836 TCP10LQ8TDR4 215 aa11□□□□□ -0.65
CUX1-217ENST00000558836 DENND1AQ8TEH3 1009 aa11□□□□□ -0.65
CUX1-217ENST00000558836 HSFY1Q96LI6 401 aa11□□□□□ -0.65
CUX1-217ENST00000558836 ZC3H7BQ9UGR2 993 aaKnown RBP11□□□□□ -0.65
CUX1-217ENST00000558836 GGA2Q9UJY4 613 aa11□□□□□ -0.65
CUX1-217ENST00000558836 MAGED2Q9UNF1 606 aaPredicted RBP11□□□□□ -0.65
CUX1-217ENST00000558836 TYROBPO43914 113 aa11□□□□□ -0.65
CUX1-217ENST00000558836 B3GAT3O94766 335 aa11□□□□□ -0.65
CUX1-217ENST00000558836 FSBPO95073 299 aa11□□□□□ -0.65
CUX1-217ENST00000558836 FYNP06241 537 aa11□□□□□ -0.65
CUX1-217ENST00000558836 ELNP15502 786 aa11□□□□□ -0.65
CUX1-217ENST00000558836 WARSP23381 471 aaKnown RBP11□□□□□ -0.65
CUX1-217ENST00000558836 YY1P25490 414 aa11□□□□□ -0.65
CUX1-217ENST00000558836 BRCC3P46736 316 aa11□□□□□ -0.65
CUX1-217ENST00000558836 MGAT5Q09328 741 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms