RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 NANOGNBQ7Z5D8 188 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 UBR7Q8N806 425 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 PSD2Q9BQI7 771 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 HEPHQ9BQS7 1158 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 AMNQ9BXJ7 453 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 ADAM33Q9BZ11 813 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 TSPYL2Q9H2G4 693 aaPredicted RBP16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 IKZF4Q9H2S9 585 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 CYP4F11Q9HBI6 524 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 C8orf4Q9NR00 106 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 HOMER2Q9NSB8 354 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 C1orf112Q9NSG2 853 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 MRGBPQ9NV56 204 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 HEY1Q9Y5J3 304 aa16.71■□□□□ 0.27
HMBOX1-212ENST00000558662 KBTBD13C9JR72 458 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 SNAP91O60641 907 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 PSMD10O75832 226 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 CALB1P05937 261 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 KRT10P13645 584 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 ZNF26P17031 533 aaPredicted RBP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 DCKP27707 260 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 SLC1A6P48664 564 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 SLC5A3P53794 718 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 YWHAGP61981 247 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 NOMO3P69849 1222 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 TAZQ16635 292 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 INSCQ1MX18 579 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 MBLAC2Q68D91 279 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 C4orf22Q6V702 233 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 DNAJC14Q6Y2X3 702 aaPredicted RBP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 FRMD7Q6ZUT3 714 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 CYP2U1Q7Z449 544 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 KSR1Q8IVT5 923 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 PACRGLQ8N7B6 248 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 TMEM102Q8N9M5 508 aaPredicted RBP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 KYQ8NBH2 561 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 PDCD6IPQ8WUM4 868 aaKnown RBP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 ATP2A3Q93084 1043 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 C12orf43Q96C57 262 aaKnown RBP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 OTUD5Q96G74 571 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 TUBA1CQ9BQE3 449 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 C1orf50Q9BV19 199 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 MECRQ9BV79 373 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 TFCP2L1Q9NZI6 479 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 ERGIC3Q9Y282 383 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 RNF11Q9Y3C5 154 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 CDY2AQ9Y6F7 541 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 CDY1Q9Y6F8 540 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 TAF1P21675 1872 aa16.7■□□□□ 0.26
HMBOX1-212ENST00000558662 TMEM191CA6NGB0 347 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 GLRA3O75311 464 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 BANF1O75531 89 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 ZBTB11O95625 1053 aaPredicted RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 C1QAP02745 245 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 FUCA1P04066 466 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.263e-9■■■□□ 15.5
HMBOX1-212ENST00000558662 POLD1P28340 1107 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 ZNF76P36508 570 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 HARS2P49590 506 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 EIF2B2P49770 351 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 CDKL1Q00532 357 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 CNTN2Q02246 1040 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 PIGGQ5H8A4 983 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 ZFYVE27Q5T4F4 411 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 C16orf46Q6P387 395 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 LINC00299Q6ZSB3 139 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 PGAM4Q8N0Y7 254 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 ABRAQ8N0Z2 381 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 PCYOX1LQ8NBM8 494 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 HIPK4Q8NE63 616 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 RP9Q8TA86 221 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 TBC1D15Q8TC07 691 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 CPA5Q8WXQ8 436 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 DUS3LQ96G46 650 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 DHRS1Q96LJ7 313 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 APOL6Q9BWW8 343 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 DRC3Q9H069 523 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 MAGEE1Q9HCI5 957 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 MARCOQ9UEW3 520 aaPredicted RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 TTLL3Q9Y4R7 772 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 RGSL1A5PLK6 1076 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 K7EPI3 171 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 PFDN6O15212 129 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 TMEM63AO94886 807 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 KRT7P08729 469 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 POLR2EP19388 210 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 ME2P23368 584 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 KLRK1P26718 216 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 ARPC4P59998 168 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 KLF10Q13118 480 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 FASTKD1Q53R41 847 aaKnown RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 CLVS1Q8IUQ0 354 aaPredicted RBP16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 MFSD14AQ96MC6 490 aa16.69■□□□□ 0.26
HMBOX1-212ENST00000558662 FERMT1Q9BQL6 677 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms