RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 EML5Q05BV3 1969 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 MYO18AQ92614 2054 aaKnown RBP16.23■□□□□ 0.19
CSHL1-208ENST00000558609 SLC12A8A0AV02 714 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 M0QYV0 167 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 SGK1O00141 431 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 TRIM24O15164 1050 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 HMBSP08397 361 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 CORO1AP31146 461 aaKnown RBP16.22■□□□□ 0.19
CSHL1-208ENST00000558609 CHKAP35790 457 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 DAOAP59103 153 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 SPEM2Q0P670 501 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 EOGTQ5NDL2 527 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 TMEM92Q6UXU6 159 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 ENOSF1Q7L5Y1 443 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 KBTBD6Q86V97 674 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 CREBRFQ8IUR6 639 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 RNF139Q8WU17 664 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 IRGQQ8WZA9 623 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 PLD4Q96BZ4 506 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 FAM81BQ96LP2 452 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 ABCC13Q9NSE7 274 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 AGO1Q9UL18 857 aaKnown RBP16.22■□□□□ 0.19
CSHL1-208ENST00000558609 USP18Q9UMW8 372 aa16.22■□□□□ 0.19
CSHL1-208ENST00000558609 TPRP12270 2363 aaKnown RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 KMT2BQ9UMN6 2715 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 GTPBP10A4D1E9 387 aaKnown RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 PRR5-ARHGAP8B1AHC4 643 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 ADAM23O75077 832 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 ALDH1A2O94788 518 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 PENKP01210 267 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 CALCAP01258 141 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 CISD3P0C7P0 127 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 LCP1P13796 627 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 HNRNPLP14866 589 aaKnown RBP eCLIP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 ERCC5P28715 1186 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 RGS7P49802 495 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 ATXN1P54253 815 aaKnown RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 MFAP3P55082 362 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 ARHGAP8P85298 464 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 LMNB2Q03252 620 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 TRIP4Q15650 581 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 C10orf76Q5T2E6 689 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 SMYD5Q6GMV2 418 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 TRIM65Q6PJ69 517 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 TRMT11Q7Z4G4 463 aaKnown RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 DENND1CQ8IV53 801 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 CPXM2Q8N436 756 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 ZNF513Q8N8E2 541 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 EDEM1Q92611 657 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 P2RY11Q96G91 374 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 POLMQ9NP87 494 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 HCN2Q9UL51 889 aa16.21■□□□□ 0.19
CSHL1-208ENST00000558609 HBS1LQ9Y450 684 aaKnown RBP16.21■□□□□ 0.19
CSHL1-208ENST00000558609 FBXO21O94952 628 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 KRT5P13647 590 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 SLC9A1P19634 815 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 SDHBP21912 280 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 GPD2P43304 727 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 RPL34P49207 117 aaKnown RBP16.2■□□□□ 0.18
CSHL1-208ENST00000558609 DGKGP49619 791 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 CSRP2Q16527 193 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 MEA1Q16626 185 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 TPD52L1Q16890 204 aaPredicted RBP16.2■□□□□ 0.18
CSHL1-208ENST00000558609 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 PLK5Q496M5 336 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 USP39Q53GS9 565 aaKnown RBP16.2■□□□□ 0.18
CSHL1-208ENST00000558609 FYB2Q5VWT5 728 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 ANO7Q6IWH7 933 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 GBP6Q6ZN66 633 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 FMNL3Q8IVF7 1028 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 FAM217AQ8IXS0 508 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 MDGA1Q8NFP4 955 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 ZDHHC4Q9NPG8 344 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 SEMA4GQ9NTN9 838 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 DACH1Q9UI36 760 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 SPTBN2O15020 2390 aa16.2■□□□□ 0.18
CSHL1-208ENST00000558609 RALGAPA1Q6GYQ0 2036 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 PRRT4C9JH25 899 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 DCLK1O15075 740 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 MED7O43513 233 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 FOXD2O60548 495 aaPredicted RBP16.19■□□□□ 0.18
CSHL1-208ENST00000558609 EPN2O95208 641 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 MTIF2P46199 727 aaKnown RBP16.19■□□□□ 0.18
CSHL1-208ENST00000558609 HARS2P49590 506 aaKnown RBP16.19■□□□□ 0.18
CSHL1-208ENST00000558609 EXOC3L4Q17RC7 722 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
CSHL1-208ENST00000558609 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 TOGARAM2Q6ZUX3 1019 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 C11orf74Q86VG3 221 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 FAM114A1Q8IWE2 563 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 OLIG1Q8TAK6 271 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 STK32AQ8WU08 396 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 ZNF606Q8WXB4 792 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 BHMTQ93088 406 aa16.19■□□□□ 0.18
CSHL1-208ENST00000558609 DUSP15Q9H1R2 295 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms