RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SFMBT2Q5VUG0 894 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 OLFML1Q6UWY5 402 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 Q6ZNB5 142 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 BEND5Q7L4P6 421 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 DQX1Q8TE96 717 aaKnown RBP12.9□□□□□ -0.34
SMAD3-205ENST00000558428 PLD4Q96BZ4 506 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 AGPAT1Q99943 283 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 OSBPL6Q9BZF3 934 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 ASNSD1Q9NWL6 643 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 ZNF510Q9Y2H8 683 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 NCAM2O15394 837 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 HSF2BPO75031 334 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 KLKB1P03952 638 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 ADH5P11766 374 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 GABRB2P47870 512 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 HARS2P49590 506 aaKnown RBP12.89□□□□□ -0.35
SMAD3-205ENST00000558428 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 TRIP4Q15650 581 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-205ENST00000558428 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 DCAF6Q58WW2 860 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 LY6G5CQ5SRR4 150 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 SYPL2Q5VXT5 272 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 IRF2BP2Q7Z5L9 587 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 XYLT1Q86Y38 959 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 DEFB106AQ8N104 65 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-205ENST00000558428 SLC30A5Q8TAD4 765 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 CPLX3Q8WVH0 158 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 IQCDQ96DY2 449 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 CHFRQ96EP1 664 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 SPHK2Q9NRA0 654 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 AIPL1Q9NZN9 384 aa12.89□□□□□ -0.35
SMAD3-205ENST00000558428 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 UNGP13051 313 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 NSFP46459 744 aaKnown RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 TBX4P57082 545 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 RNASE9P60153 205 aaKnown RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 CENPCQ03188 943 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 GAD2Q05329 585 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 KLHL30Q0D2K2 578 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 CLEC16AQ2KHT3 1053 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 ANO4Q32M45 955 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 FAM102AQ5T9C2 384 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 E4F1Q66K89 784 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 NAIF1Q69YI7 327 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 SLC26A9Q7LBE3 791 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 TMEM25Q86YD3 366 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 ADAM32Q8TC27 787 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 CD101Q93033 1021 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 P2RY13Q9BPV8 354 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 LMAN1LQ9HAT1 526 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 AGO1Q9UL18 857 aaKnown RBP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 CAPN11Q9UMQ6 739 aa12.88□□□□□ -0.35
SMAD3-205ENST00000558428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMAD3-205ENST00000558428 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
SMAD3-205ENST00000558428 GOLGA8SH3BPF8 625 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-205ENST00000558428 DAB1O75553 588 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
SMAD3-205ENST00000558428 GYPCP04921 128 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 CHRNB1P11230 501 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 MMP8P22894 467 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 CHKAP35790 457 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 SCNN1AP37088 669 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 OPRD1P41143 372 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 PRKCIP41743 596 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 MAGEA9P43362 315 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 GALK1P51570 392 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 PITX1P78337 314 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-205ENST00000558428 ZBED6P86452 979 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 CDK17Q00537 523 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 RING1Q06587 406 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 NNTQ13423 1086 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 FZD5Q13467 585 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 LRRC32Q14392 662 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 GAB4Q2WGN9 574 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 TMEM196Q5HYL7 178 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 NUGGCQ68CJ6 796 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 UNC45BQ8IWX7 931 aa12.87□□□□□ -0.35
SMAD3-205ENST00000558428 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms