RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 EFEMP1Q12805 493 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 MTAPQ13126 283 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 NCAPHQ15003 741 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 E2F5Q15329 346 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 EFHC1Q5JVL4 640 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 LY6G5CQ5SRR4 150 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 DPY19L2P1Q6NXN4 242 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 ZNF677Q86XU0 584 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 MIB1Q86YT6 1006 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 ZDHHC17Q8IUH5 632 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 UNC45BQ8IWX7 931 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 BBS7Q8IWZ6 715 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 TMEM35BQ8NCS4 154 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 NEK11Q8NG66 645 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 ATRIPQ8WXE1 791 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 PLD4Q96BZ4 506 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 PCMTD1Q96MG8 357 aaPredicted RBP8.87□□□□□ -0.99
TPM1-213ENST00000558400 XPO6Q96QU8 1125 aaKnown RBP8.87□□□□□ -0.99
TPM1-213ENST00000558400 SPAG5Q96R06 1193 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 ERGIC2Q96RQ1 377 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 PNKPQ96T60 521 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 LSM14BQ9BX40 385 aaKnown RBP8.87□□□□□ -0.99
TPM1-213ENST00000558400 NAA15Q9BXJ9 866 aaKnown RBP8.87□□□□□ -0.99
TPM1-213ENST00000558400 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
TPM1-213ENST00000558400 RASAL2Q9UJF2 1139 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 NUDT5Q9UKK9 219 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 NUP210Q8TEM1 1887 aaPredicted RBP8.87□□□□□ -0.99
TPM1-213ENST00000558400 ATRXP46100 2492 aa8.87□□□□□ -0.99
TPM1-213ENST00000558400 ZNF638Q14966 1978 aaKnown RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 ANAPC1Q9H1A4 1944 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 SLC12A8A0AV02 714 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CHURC1-FNTBB4DL54 471 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CAPN9O14815 690 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 HOXC11O43248 304 aaPredicted RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 GREM1O60565 184 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 PAPSS2O95340 614 aaPredicted RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 LATS1O95835 1130 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CYBBP04839 570 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 APODP05090 189 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 SP9P0CG40 484 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 IRF1P10914 325 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 NCAM1P13591 858 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CYP11B1P15538 503 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 HOXA6P31267 233 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 STAT1P42224 750 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 GRIA2P42262 883 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 POLR2FP61218 127 aaKnown RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 YWHAZP63104 245 aaKnown RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 MRPS21P82921 87 aaKnown RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 APBA1Q02410 837 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CSTF1Q05048 431 aaKnown RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 RING1Q06587 406 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 MTA1Q13330 715 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 NNTQ13423 1086 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 TRIP4Q15650 581 aaPredicted RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 ANO4Q32M45 955 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 HSF5Q4G112 596 aaPredicted RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 FSTL4Q6MZW2 842 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 MSANTD2Q6P1R3 559 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 DENND1BQ6P3S1 775 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 Q6ZNB5 142 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 SLC47A2Q86VL8 602 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 TMEM25Q86YD3 366 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CPXM2Q8N436 756 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CAMKK1Q8N5S9 505 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 AOPEPQ8N6M6 819 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 MSANTD4Q8NCY6 345 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 AZIN2Q96A70 460 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 FAM149B1Q96BN6 582 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CHFRQ96EP1 664 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 PPP1R13BQ96KQ4 1090 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 DDX50Q9BQ39 737 aaKnown RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 FAM207AQ9NSI2 230 aaPredicted RBP8.86□□□□□ -0.99
TPM1-213ENST00000558400 ASNSD1Q9NWL6 643 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 ZSCAN32Q9NX65 697 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 MARK1Q9P0L2 795 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 DEC1Q9P2X7 70 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 PCDHGA2Q9Y5H1 932 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 FHOD1Q9Y613 1164 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 ZFHX4Q86UP3 3567 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 OTOGLQ3ZCN5 2332 aa8.86□□□□□ -0.99
TPM1-213ENST00000558400 CCDC163A0A0D9SF12 145 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SYCE3A1L190 88 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 TBC1D3BA6NDS4 549 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 F8VZ95 297 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 MDM4O15151 490 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 KAT7O95251 611 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 LSM8O95777 96 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 EGFP01133 1207 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 CALCAP01258 141 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SLC2A3P11169 496 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 CORO1AP31146 461 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 GBP1P32455 592 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 CDH5P33151 784 aaPredicted RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 CNR2P34972 360 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SOX5P35711 763 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 OPRD1P41143 372 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms