RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 HTR3DQ70Z44 454 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 SND1Q7KZF4 910 aaKnown RBP eCLIP14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 STRADAQ7RTN6 431 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 TMEM139Q8IV31 216 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 LRRC8AQ8IWT6 810 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 RHOT2Q8IXI1 618 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 DEFB106AQ8N104 65 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 DQX1Q8TE96 717 aaKnown RBP14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 ZFRQ96KR1 1074 aaKnown RBP14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 NPY6RQ99463 290 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 METTL5Q9NRN9 209 aaKnown RBP14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 CPQQ9Y646 472 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 F5P12259 2224 aa14.72□□□□□ -0.05
SUPT16H-208ENST00000557652 TTC28Q96AY4 2481 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 HEPACAM2A8MVW5 462 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 CHADO15335 359 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 IRAK2O43187 625 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 ENDOD1O94919 500 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 PRAMEF12O95522 483 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 TRUB2O95900 331 aaKnown RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 IGLV3-27P01718 113 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 HARS2P49590 506 aaKnown RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 PGFP49763 221 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 ZNF143P52747 638 aaPredicted RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 GALCP54803 685 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 MLLT6P55198 1093 aaPredicted RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 PFKPQ01813 784 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 EIF4EBP2Q13542 120 aaPredicted RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 PPP2R5DQ14738 602 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 PDGFRLQ15198 375 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 BRMS1LQ5PSV4 323 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 YAF2Q8IY57 180 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 SH3RF2Q8TEC5 729 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 UBE2Q2Q8WVN8 375 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 NDRG1Q92597 394 aaKnown RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 EDEM1Q92611 657 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 DNASE1L2Q92874 299 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 IRF7Q92985 503 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 PIWIL1Q96J94 861 aaKnown RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 SLC22A12Q96S37 553 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 CYP2S1Q96SQ9 504 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 DDX50Q9BQ39 737 aaKnown RBP14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 CNPY3Q9BT09 278 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 KCNK12Q9HB15 430 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 SLC12A6Q9UHW9 1150 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 RASAL2Q9UJF2 1139 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 SH3BP1Q9Y3L3 701 aa14.71□□□□□ -0.05
SUPT16H-208ENST00000557652 MYOFQ9NZM1 2061 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 A0A0A6YYK5 440 aaPredicted RBP14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 LEFTY2O00292 366 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 NRG2O14511 850 aaPredicted RBP14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 MTA2O94776 668 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 APOEP02649 317 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 GPD1P21695 349 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 CCR1P32246 355 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 FLT3P36888 993 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 MAGEA1P43355 309 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 AIF1P55008 147 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 TBX4P57082 545 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 TDGQ13569 410 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 MTF1Q14872 753 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 TAF5Q15542 800 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 SYPL2Q5VXT5 272 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 TANGO2Q6ICL3 276 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 PARM1Q6UWI2 310 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 UBALD2Q8IYN6 164 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 GJD3Q8N144 294 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 RFFLQ8WZ73 363 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 CENPIQ92674 756 aaPredicted RBP14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 FGF14Q92915 247 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 MSANTD3Q96H12 275 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 SLC39A13Q96H72 371 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 TRMT61BQ9BVS5 477 aaKnown RBP14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 THAP2Q9H0W7 228 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 FAM204AQ9H8W3 233 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 SPTLC3Q9NUV7 552 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 LIMD1Q9UGP4 676 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 STOML2Q9UJZ1 356 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 SORCS3Q9UPU3 1222 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 NUMBLQ9Y6R0 609 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 SPTBN5Q9NRC6 3674 aaKnown RBP14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 DOCK4Q8N1I0 1966 aa14.7□□□□□ -0.06
SUPT16H-208ENST00000557652 SLC12A8A0AV02 714 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 TMEM191CA6NGB0 347 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 SOWAHDA6NJG2 315 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 BTNL10A8MVZ5 291 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 GRAP2O75791 330 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 STC2O76061 302 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 TBX18O95935 607 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 ABCB4P21439 1286 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 RDXP35241 583 aaKnown RBP14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 RFC1P35251 1148 aaPredicted RBP14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 CHKAP35790 457 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 ARHGAP25P42331 645 aa14.69□□□□□ -0.06
SUPT16H-208ENST00000557652 HADHBP55084 474 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms