RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ALDH18A1P54886 795 aaKnown RBP5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 ACTR2P61160 394 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 UBE3AQ05086 875 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 EFR3AQ14156 821 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 FAXCQ5TGI0 409 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 TTLL5Q6EMB2 1281 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 FASTKD5Q7L8L6 764 aaKnown RBP5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 ADSSL1Q8N142 457 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 LINC00482Q8N8I6 264 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 CPT1CQ8TCG5 803 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 SMCR8Q8TEV9 937 aaPredicted RBP5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 CENPIQ92674 756 aaPredicted RBP5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 SCAMP4Q969E2 229 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 TRAPPC9Q96Q05 1148 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 DDX23Q9BUQ8 820 aaKnown RBP5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 SPATA5L1Q9BVQ7 753 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 CARD11Q9BXL7 1154 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 CPEB1Q9BZB8 566 aaKnown RBP5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 OR10A2Q9H208 303 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 SLC6A15Q9H2J7 730 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 GSTO2Q9H4Y5 243 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 PREBQ9HCU5 417 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 PRDM8Q9NQV8 689 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 ZSCAN32Q9NX65 697 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 POGKQ9P215 609 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 ARHGAP26Q9UNA1 814 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 ATP11BQ9Y2G3 1177 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 BCORQ6W2J9 1755 aa5.5□□□□□ -1.53
MTHFD1-216ENST00000557539 CEP250Q9BV73 2442 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 ETV2O00321 342 aaPredicted RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 PCDH17O14917 1159 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 COQ9O75208 318 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 RPS6KA4O75676 772 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 AGFG2O95081 481 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 GLP2RO95838 553 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 AMHP03971 560 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 ANXA1P04083 346 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 SNRPA1P09661 255 aaKnown RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 SRGAP2BP0DMP2 458 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 MED14OSP0DP75 135 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 ZSCAN22P10073 491 aaPredicted RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 ALAS1P13196 640 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 LIMS1P48059 325 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 PTDSS1P48651 473 aaKnown RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 CCR5P51681 352 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 ADCY7P51828 1080 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 POU5F1Q01860 360 aaKnown RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 NSUN2Q08J23 767 aaKnown RBP eCLIP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 SCAPQ12770 1279 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 KCNAB1Q14722 419 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 SLC5A9Q2M3M2 681 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 PLA1AQ53H76 456 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 ATPAF1Q5TC12 328 aaPredicted RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 AGBL4Q5VU57 503 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 SPATA1Q5VX52 437 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 FAM160B1Q5W0V3 765 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 FCRL6Q6DN72 434 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 MRNIPQ6NTE8 343 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 KRT73Q86Y46 540 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 CMTM4Q8IZR5 234 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 TMIEQ8NEW7 156 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 OR14K1Q8NGZ2 314 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 CEP70Q8NHQ1 597 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 NUP133Q8WUM0 1156 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 LBHD1Q9BQE6 289 aaPredicted RBP5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 IMPG2Q9BZV3 1241 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 EPC1Q9H2F5 836 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 FBXO34Q9NWN3 711 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 DTNAQ9Y4J8 743 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 KDM3BQ7LBC6 1761 aa5.49□□□□□ -1.53
MTHFD1-216ENST00000557539 TRIOO75962 3097 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 SPTAN1Q13813 2472 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 CARMIL3Q8ND23 1372 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 RAB3GAP2Q9H2M9 1393 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 A0A1W2PPH5 198 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 CDHR4A6H8M9 788 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 PROB1E7EW31 1015 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 H0Y3Z8 333 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 VPS4BO75351 444 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 CHEK2O96017 543 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 POMCP01189 267 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 SERPINB2P05120 415 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 PRKCBP05771 671 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 ZNF888P0CJ79 500 aaPredicted RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 XRCC6P12956 609 aaKnown RBP eCLIP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 IGFBP6P24592 240 aaPredicted RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 KLRK1P26718 216 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 AKT1P31749 480 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 NPEPPSP55786 919 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 CHRNDQ07001 517 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 CRHR2Q13324 411 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 KRT32Q14532 448 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 SHHQ15465 462 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 NPY5RQ15761 445 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 INSCQ1MX18 579 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 TRIM71Q2Q1W2 868 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 GAGE13Q4V321 117 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms