RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PPP4R4Q6NUP7 873 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 ANKRD16Q6P6B7 361 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 RD3Q7Z3Z2 195 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 KIAA0319LQ8IZA0 1049 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 NSUN7Q8NE18 718 aaKnown RBP4.58□□□□□ -1.68
CHD8-212ENST00000557329 GPR150Q8NGU9 434 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 SMCR8Q8TEV9 937 aaPredicted RBP4.58□□□□□ -1.68
CHD8-212ENST00000557329 IPCEF1Q8WWN9 437 aaPredicted RBP4.58□□□□□ -1.68
CHD8-212ENST00000557329 LPIN2Q92539 896 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 TTC17Q96AE7 1141 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 LRIG1Q96JA1 1093 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 CLMNQ96JQ2 1002 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 SLC46A1Q96NT5 459 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 TRIM54Q9BYV2 358 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 DPH1Q9BZG8 443 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 LRRC27Q9C0I9 530 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 TRMT13Q9NUP7 481 aaKnown RBP4.58□□□□□ -1.68
CHD8-212ENST00000557329 MTMR10Q9NXD2 777 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 XPR1Q9UBH6 696 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 TRMT112Q9UI30 125 aaKnown RBP4.58□□□□□ -1.68
CHD8-212ENST00000557329 TPCN1Q9ULQ1 816 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 L1RE1Q9UN81 338 aa4.58□□□□□ -1.68
CHD8-212ENST00000557329 SCN7AQ01118 1682 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 KIF7Q2M1P5 1343 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 UNC80Q8N2C7 3258 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 VPS4BO75351 444 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 DNAJB5O75953 348 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 UFL1O94874 794 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 INMTO95050 263 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 CCL5P13501 91 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 ZFXP17010 805 aaPredicted RBP4.57□□□□□ -1.68
CHD8-212ENST00000557329 NDUFB7P17568 137 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 HDCP19113 662 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 EIF2S2P20042 333 aaKnown RBP4.57□□□□□ -1.68
CHD8-212ENST00000557329 ARFIP2P53365 341 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 UBXN2AP68543 259 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 MC2RQ01718 297 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 GRAPQ13588 217 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 INSCQ1MX18 579 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 TBC1D25Q3MII6 688 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 DPY19L2P1Q6NXN4 242 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 DARS2Q6PI48 645 aaKnown RBP4.57□□□□□ -1.68
CHD8-212ENST00000557329 TMEM108Q6UXF1 575 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 NPNTQ6UXI9 565 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 MCM10Q7L590 875 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 GAS2L3Q86XJ1 694 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 BOLLQ8N9W6 283 aaKnown RBP4.57□□□□□ -1.68
CHD8-212ENST00000557329 ZBTB34Q8NCN2 500 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 GRAPLQ8TC17 118 aaPredicted RBP4.57□□□□□ -1.68
CHD8-212ENST00000557329 PPM1EQ8WY54 764 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 TBC1D5Q92609 795 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 MRGPRX1Q96LB2 322 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 MXD3Q9BW11 206 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 ARMT1Q9H993 441 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 PANK3Q9H999 370 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 A1CFQ9NQ94 594 aaKnown RBP4.57□□□□□ -1.68
CHD8-212ENST00000557329 POLLQ9UGP5 575 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 CPA4Q9UI42 421 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 AGAP1Q9UPQ3 857 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 CEP290O15078 2479 aa4.57□□□□□ -1.68
CHD8-212ENST00000557329 MRC1P22897 1456 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 MAP3K15Q6ZN16 1313 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 UBN2Q6ZU65 1347 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 ADGRA2Q96PE1 1338 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 A0A087WWL8 130 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 A0A1W2PPC1 479 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 MBD3L4A6NDZ8 208 aaPredicted RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 MBD3L3A6NE82 208 aaPredicted RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 ERVV-1B6SEH8 477 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 GOLIM4O00461 696 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 BTN3A1O00481 513 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 CCP110O43303 1012 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 ZBED1O96006 694 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 PRKCBP05771 671 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 CHRM2P08172 466 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 PLA2G5P39877 138 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 SLC11A2P49281 568 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 RBM5P52756 815 aaKnown RBP eCLIP4.56□□□□□ -1.68
CHD8-212ENST00000557329 MAPK10P53779 464 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 DCTN1Q14203 1278 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 GBX1Q14549 363 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 POLD3Q15054 466 aaPredicted RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 SUMO4Q6EEV6 95 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 FBXO42Q6P3S6 717 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 CHST15Q7LFX5 561 aaPredicted RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 OVCH2Q7RTZ1 564 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 PEG10Q86TG7 708 aaKnown RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 RAB11FIP4Q86YS3 637 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 PLBD2Q8NHP8 589 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 RP9Q8TA86 221 aaKnown RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 TFAP2BQ92481 460 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 ANKS1AQ92625 1134 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 SARAFQ96BY9 339 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 CCDC136Q96JN2 1154 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 HAPLN3Q96S86 360 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 THUMPD2Q9BTF0 503 aaKnown RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 LRFN3Q9BTN0 628 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 B3GNT5Q9BYG0 378 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 ARHGAP39Q9C0H5 1083 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 VEZTQ9HBM0 779 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms