RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 PREPLQ4J6C6 727 aaPredicted RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 LY6G5CQ5SRR4 150 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 OR6B2Q6IFH4 312 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 FSTL4Q6MZW2 842 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 ERICH1Q86X53 443 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 TMEM25Q86YD3 366 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 C1orf131Q8NDD1 294 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 PRSS33Q8NF86 280 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 FAM149B1Q96BN6 582 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 EDEM3Q9BZQ6 932 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 SYNCQ9H7C4 482 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 POPDC2Q9HBU9 364 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 FBRSL1Q9HCM7 1045 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 ASNSD1Q9NWL6 643 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 WDR35Q9P2L0 1181 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 RAPGEFL1Q9UHV5 662 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 NOCTQ9UK39 431 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 AGO1Q9UL18 857 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 MYO6Q9UM54 1294 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 NAALADL1Q9UQQ1 740 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 MYOFQ9NZM1 2061 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 A0A0A0MRY4 1105 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 HOXC11O43248 304 aaPredicted RBP11.15□□□□□ -0.62
LINC00239-201ENST00000556973 CYP1A1P04798 512 aaPredicted RBP11.15□□□□□ -0.62
LINC00239-201ENST00000556973 FERP16591 822 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 OPRD1P41143 372 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 RING1Q06587 406 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 TCF15Q12870 199 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 ANO4Q32M45 955 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 PTPN20Q4JDL3 420 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 TRIM72Q6ZMU5 477 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 TOGARAM2Q6ZUX3 1019 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 DENND1CQ8IV53 801 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 UNC45BQ8IWX7 931 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 CPXM2Q8N436 756 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 MSANTD4Q8NCY6 345 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 ZNF397Q8NF99 534 aaPredicted RBP11.15□□□□□ -0.62
LINC00239-201ENST00000556973 CCDC26Q8TAB7 109 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 IPO4Q8TEX9 1081 aaKnown RBP11.15□□□□□ -0.62
LINC00239-201ENST00000556973 CPA5Q8WXQ8 436 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 C18orf8Q96DM3 657 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 PNKPQ96T60 521 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 TJP2Q9UDY2 1190 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 TLR6Q9Y2C9 796 aa11.15□□□□□ -0.62
LINC00239-201ENST00000556973 KIAA1549LQ6ZVL6 1849 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 ZNF318Q5VUA4 2279 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.14□□□□□ -0.63
LINC00239-201ENST00000556973 H0Y858 1186 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 LAMTOR5O43504 91 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 HSF2BPO75031 334 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 ATG13O75143 517 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 LATS1O95835 1130 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 EGFP01133 1207 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 IGLV3-27P01718 113 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 ERBB2P04626 1255 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 CHRNB2P17787 502 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SLC6A11P48066 632 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 TBX4P57082 545 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 NOMO3P69849 1222 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 FMO1Q01740 532 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 ARID5AQ03989 594 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 MTAPQ13126 283 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 NNTQ13423 1086 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 ANGPT1Q15389 498 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 TAF5Q15542 800 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 ADGRF1Q5T601 910 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SYPL2Q5VXT5 272 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 NUGGCQ68CJ6 796 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 NUDT18Q6ZVK8 323 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 FAM183BPQ6ZVS7 135 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SLC26A9Q7LBE3 791 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 IRF2BP2Q7Z5L9 587 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 FAM217AQ8IXS0 508 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SPEM1Q8N4L4 309 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SLC20A1Q8WUM9 679 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 BAP1Q92560 729 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 AZIN2Q96A70 460 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SERPINB11Q96P15 392 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 SLC2A13Q96QE2 648 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
LINC00239-201ENST00000556973 AGPAT1Q99943 283 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 BBS2Q9BXC9 721 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
LINC00239-201ENST00000556973 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 DEC1Q9P2X7 70 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 STOML2Q9UJZ1 356 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 FBXO4Q9UKT5 387 aa11.14□□□□□ -0.63
LINC00239-201ENST00000556973 NEDD8-MDP1E9PL57 170 aa11.13□□□□□ -0.63
LINC00239-201ENST00000556973 MSI1O43347 362 aaKnown RBP11.13□□□□□ -0.63
LINC00239-201ENST00000556973 CYBBP04839 570 aa11.13□□□□□ -0.63
LINC00239-201ENST00000556973 APODP05090 189 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms