RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 HEPACAM2A8MVW5 462 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 LOC730098B7Z3J9 87 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 ANHXE9PGG2 379 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 M0QYT0 321 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 MYO1FO00160 1098 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 RNF8O76064 485 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TBX18O95935 607 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 APOEP02649 317 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 CYP1A2P05177 515 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 FYNP06241 537 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 BMP1P13497 986 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 PSMC3P17980 439 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 RFC1P35251 1148 aaPredicted RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 PTPN9P43378 593 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 PGFP49763 221 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 SULT1E1P49888 294 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TBX4P57082 545 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 ZP2Q05996 745 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 DEUP1Q05D60 604 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 RING1Q06587 406 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 MAMLD1Q13495 774 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 HTR4Q13639 388 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 ACAP1Q15027 740 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TAF5Q15542 800 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TRIP4Q15650 581 aaPredicted RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 SLC25A52Q3SY17 297 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 ARHGAP29Q52LW3 1261 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 SYPL2Q5VXT5 272 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 NUGGCQ68CJ6 796 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 PHLDB2Q86SQ0 1253 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 RHOT2Q8IXI1 618 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TTC16Q8NEE8 873 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 BPIFB1Q8TDL5 484 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 FNIP1Q8TF40 1166 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 RXFP2Q8WXD0 754 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.145e-6■■□□□ 14.1
TDP1-214ENST00000556063 RNF34Q969K3 372 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 OTUB2Q96DC9 234 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 PIWIL1Q96J94 861 aaKnown RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 CALR3Q96L12 384 aaKnown RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 MCEEQ96PE7 176 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 SLC22A12Q96S37 553 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 NPY6RQ99463 290 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 DDX50Q9BQ39 737 aaKnown RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 CNPY3Q9BT09 278 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TRMT61BQ9BVS5 477 aaKnown RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 NUP85Q9BW27 656 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 KLF16Q9BXK1 252 aaPredicted RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 THAP2Q9H0W7 228 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.96□□□□□ -1.14
TDP1-214ENST00000556063 DDIT4Q9NX09 232 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 CTTNBP2NLQ9P2B4 639 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 CFAP97Q9P2B7 532 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 LIMD1Q9UGP4 676 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 IP6K2Q9UHH9 426 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 NENFQ9UMX5 172 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TLR6Q9Y2C9 796 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 F5P12259 2224 aa7.96□□□□□ -1.14
TDP1-214ENST00000556063 TCRBV5S1A1TA0A578 114 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 TMEM191CA6NGB0 347 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 C2CD4BA6NLJ0 364 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 LEFTY2O00292 366 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 ZNF263O14978 683 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 MDM4O15151 490 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 IRAK2O43187 625 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 STC2O76061 302 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 PRAMEF12O95522 483 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 LATS1O95835 1130 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 ATXN8OSP0DMR3 200 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 PSMA2P25787 234 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 CCR1P32246 355 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 RDXP35241 583 aaKnown RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 FLT3P36888 993 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 VIPR2P41587 438 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 NOP2P46087 812 aaKnown RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 IFNAR2P48551 515 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 SLC11A2P49281 568 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 VAV2P52735 878 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 ZNF143P52747 638 aaPredicted RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 PFKPQ01813 784 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 KIF5AQ12840 1032 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 USP4Q13107 963 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 NME3Q13232 169 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 PIGHQ14442 188 aaPredicted RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 PPP2R5DQ14738 602 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 MTF1Q14872 753 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 PDGFRLQ15198 375 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 IFI16Q16666 785 aaKnown RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 ARL13BQ3SXY8 428 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 BRMS1LQ5PSV4 323 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 ACBD5Q5T8D3 534 aaPredicted RBP7.95□□□□□ -1.14
TDP1-214ENST00000556063 TANGO2Q6ICL3 276 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 PARM1Q6UWI2 310 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 RAD9BQ6WBX8 426 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 HTR3DQ70Z44 454 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 STRADAQ7RTN6 431 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 TAC4Q86UU9 113 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 TMEM139Q8IV31 216 aa7.95□□□□□ -1.14
TDP1-214ENST00000556063 MFSD6LQ8IWD5 586 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms