RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 RING1Q06587 406 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 KIF5AQ12840 1032 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 MTA1Q13330 715 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 EIF4EBP2Q13542 120 aaPredicted RBP17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 ZNF662Q6ZS27 426 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 MTSS1LQ765P7 747 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 STRADAQ7RTN6 431 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 BNIPLQ7Z465 357 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 EMC1Q8N766 993 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 TDRD5Q8NAT2 981 aaKnown RBP17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 SLC35G2Q8TBE7 412 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 ZNF564Q8TBZ8 553 aaPredicted RBP17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 CYP2S1Q96SQ9 504 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 PRDM6Q9NQX0 595 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 RASAL2Q9UJF2 1139 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 TLR6Q9Y2C9 796 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 PAXBP1Q9Y5B6 917 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 IRAK2O43187 625 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 TRIP4Q15650 581 aaPredicted RBP17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 CCDC14Q49A88 953 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 FAM78AQ5JUQ0 283 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 TRNP1Q6NT89 227 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 POTEHQ6S545 545 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 TAC4Q86UU9 113 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 ZDHHC14Q8IZN3 488 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 CELF5Q8N6W0 485 aaKnown RBP17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 CENPIQ92674 756 aaPredicted RBP17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 NXPE3Q969Y0 559 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 PLD4Q96BZ4 506 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 ZFRQ96KR1 1074 aaKnown RBP17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 KLF16Q9BXK1 252 aaPredicted RBP17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 TSGA10Q9BZW7 698 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 IP6K2Q9UHH9 426 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 NUDT5Q9UKK9 219 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 CPQQ9Y646 472 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 XIRP2A4UGR9 3374 aa17.14■□□□□ 0.33
SPTLC2-203ENST00000554901 M0QYT0 321 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 MYO1FO00160 1098 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 GJB6O95452 261 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 SLC2A3P11169 496 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 SULT1E1P49888 294 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 PIGHQ14442 188 aaPredicted RBP17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 SND1Q7KZF4 910 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 MIB1Q86YT6 1006 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 NIPA2Q8N8Q9 360 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 USP13Q92995 863 aaPredicted RBP17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 CFAP57Q96MR6 1250 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 ZFP14Q9HCL3 533 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 DDIT4Q9NX09 232 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 SFMBT1Q9UHJ3 866 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 ANAPC7Q9UJX3 599 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 PRUNE2Q8WUY3 3088 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 DOCK8Q8NF50 2099 aa17.13■□□□□ 0.33
SPTLC2-203ENST00000554901 SLC12A8A0AV02 714 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 RCCD1A6NED2 376 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 MDM4O15151 490 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 KRT86O43790 486 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 IGLV3-27P01718 113 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 RDXP35241 583 aaKnown RBP17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 PPP2R5DQ14738 602 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 NUGGCQ68CJ6 796 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 UNC45BQ8IWX7 931 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 ELSPBP1Q96BH3 223 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 SLC39A13Q96H72 371 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 TBCBQ99426 244 aa17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
SPTLC2-203ENST00000554901 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ANHXE9PGG2 379 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ECI2O75521 394 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 RNF8O76064 485 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 PRAMEF12O95522 483 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 LATS1O95835 1130 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 IL9P15248 144 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 FCARP24071 287 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 PSMA2P25787 234 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 CCR1P32246 355 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 MAN1A1P33908 653 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 TBX4P57082 545 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 OGDHQ02218 1023 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 DEUP1Q05D60 604 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 USP4Q13107 963 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 HS1BP3Q53T59 392 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 BRMS1LQ5PSV4 323 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 OTUD1Q5VV17 481 aaPredicted RBP17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ADHFE1Q8IWW8 467 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 SH3RF2Q8TEC5 729 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 AZIN2Q96A70 460 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 LACRTQ9GZZ8 138 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 SMPD4Q9NXE4 827 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 LSM7Q9UK45 103 aaKnown RBP17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ZNF510Q9Y2H8 683 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 PPP2R2CQ9Y2T4 447 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 C2CD4DB7Z1M9 353 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9435.3 ms