RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ZNF697Q5TEC3 545 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 OTUD1Q5VV17 481 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 PDZD4Q76G19 769 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 CPNE8Q86YQ8 564 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 TMC8Q8IU68 726 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 RCOR2Q8IZ40 523 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ARFGAP1Q8N6T3 406 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 EFHBQ8N7U6 833 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 EXD1Q8NHP7 514 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 KRT35Q92764 455 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 RNF34Q969K3 372 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 NTAN1Q96AB6 310 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 NAP1L3Q99457 506 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 CORO1BQ9BR76 489 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ZWILCHQ9H900 591 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 IL21Q9HBE4 155 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ZNF334Q9HCZ1 680 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 RRAGDQ9NQL2 400 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 OSER1Q9NX31 292 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 MARCH2Q9P0N8 246 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 PCSK1NQ9UHG2 260 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 RASAL2Q9UJF2 1139 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 CDC23Q9UJX2 597 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 TLR6Q9Y2C9 796 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 HBS1LQ9Y450 684 aaKnown RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 CLUHO75153 1309 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PDE4DIPQ5VU43 2346 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 SYNJ2BP-COX16A0A087WUM0 186 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 CCDC195A0A1B0GUA6 201 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 RFPL2O75678 378 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 KRT1P04264 644 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 MYL4P12829 197 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 TFE3P19532 575 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PAFAH1B1P43034 410 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PGFP49763 221 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 ZNF135P52742 658 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PITX1P78337 314 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-206ENST00000554685 CKAP4Q07065 602 aaKnown RBP14.94□□□□□ -0.02
SHOX2-206ENST00000554685 SCAPQ12770 1279 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 EFEMP1Q12805 493 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 KCNC3Q14003 757 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PPP2R5DQ14738 602 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PDK2Q15119 407 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 TRIP4Q15650 581 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-206ENST00000554685 WHAMMP3Q1A5X7 153 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 ARHGAP15Q53QZ3 475 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 TCEAL5Q5H9L2 206 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 EFHC2Q5JST6 749 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 ERMARDQ5T6L9 678 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 CCDC181Q5TID7 509 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 DAB2IPQ5VWQ8 1189 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 TMEM184AQ6ZMB5 413 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 FAM131BQ86XD5 332 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 VSIG1Q86XK7 387 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 ALG3Q92685 438 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 LRRC3Q9BY71 257 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 ATXN3LQ9H3M9 355 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 WDCPQ9H6R7 721 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PIDD1Q9HB75 910 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 PIGVQ9NUD9 493 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.94□□□□□ -0.02
SHOX2-206ENST00000554685 COX16Q9P0S2 106 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 SLC12A6Q9UHW9 1150 aa14.94□□□□□ -0.02
SHOX2-206ENST00000554685 CEP104O60308 925 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 TADA3O75528 432 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 OAS1P00973 400 aaKnown RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 APOEP02649 317 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 RHOP08100 348 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 RARAP10276 462 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 HOXB8P17481 243 aaPredicted RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 POU3F3P20264 500 aaPredicted RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 IL1R2P27930 398 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 TBX4P57082 545 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 COG7P83436 770 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 RING1Q06587 406 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 EIF4EBP2Q13542 120 aaPredicted RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 NUGGCQ68CJ6 796 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 CCDC50Q8IVM0 306 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 HS6ST3Q8IZP7 471 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 KCTD6Q8NC69 237 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 ADAM32Q8TC27 787 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 SMG7Q92540 1137 aaKnown RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 HSPH1Q92598 858 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 PSMB7Q99436 277 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 SNRNP25Q9BV90 132 aaKnown RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 PRDM12Q9H4Q4 367 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 CCSER2Q9H7U1 834 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 WDR6Q9NNW5 1121 aaKnown RBP14.93□□□□□ -0.02
SHOX2-206ENST00000554685 SFMBT1Q9UHJ3 866 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 AP4E1Q9UPM8 1137 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 MRFAP1Q9Y605 127 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 GREB1Q4ZG55 1949 aa14.93□□□□□ -0.02
SHOX2-206ENST00000554685 CHD9Q3L8U1 2897 aa14.92□□□□□ -0.02
SHOX2-206ENST00000554685 MTCL1Q9Y4B5 1905 aaKnown RBP14.92□□□□□ -0.02
SHOX2-206ENST00000554685 TRAV19A0A0A6YYK7 116 aa14.92□□□□□ -0.02
SHOX2-206ENST00000554685 SLC12A8A0AV02 714 aa14.92□□□□□ -0.02
SHOX2-206ENST00000554685 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms