RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 NTAN1Q96AB6 310 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 KLHL5Q96PQ7 755 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 DHX35Q9H5Z1 703 aaKnown RBP18.29■□□□□ 0.52
PSEN1-206ENST00000553447 LRRC19Q9H756 370 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 CLIC5Q9NZA1 410 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.29■□□□□ 0.52
PSEN1-206ENST00000553447 IRAK3Q9Y616 596 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 OBSL1O75147 1896 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 ZNF487B1APH4 448 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 IRAK2O43187 625 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 RAD51CO43502 376 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 ADH1AP07327 375 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 CA3P07451 260 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 ZDHHC11BP0C7U3 371 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 CSH1P0DML2 217 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 CSH2P0DML3 217 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 DNAJB1P25685 340 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 ADRA1BP35368 520 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 MRPS25P82663 173 aaKnown RBP18.28■□□□□ 0.52
PSEN1-206ENST00000553447 MMRN1Q13201 1228 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 EIF4EBP2Q13542 120 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-206ENST00000553447 BBS12Q6ZW61 710 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 SPRED2Q7Z698 418 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 RFX6Q8HWS3 928 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 CCDC26Q8TAB7 109 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 C1orf54Q8WWF1 131 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 CASP10Q92851 521 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 SAMD11Q96NU1 681 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 KCTD15Q96SI1 283 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-206ENST00000553447 PNKPQ96T60 521 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 EMILIN2Q9BXX0 1053 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 DCLK3Q9C098 648 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 TLR9Q9NR96 1032 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 HOMER3Q9NSC5 361 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 MTMR10Q9NXD2 777 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 AMACRQ9UHK6 382 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 FBXW11Q9UKB1 542 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 MAGED2Q9UNF1 606 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-206ENST00000553447 R3HDM2Q9Y2K5 976 aaKnown RBP18.28■□□□□ 0.52
PSEN1-206ENST00000553447 PCDHA11Q9Y5I1 949 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 INSL5Q9Y5Q6 135 aa18.28■□□□□ 0.52
PSEN1-206ENST00000553447 ANAPC1Q9H1A4 1944 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 TGM5O43548 720 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 CST8O60676 142 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 RARGP13631 454 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 HMGA1P17096 107 aaKnown RBP18.27■□□□□ 0.52
PSEN1-206ENST00000553447 IL4RP24394 825 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 COILP38432 576 aaPredicted RBP18.27■□□□□ 0.52
PSEN1-206ENST00000553447 FNTAP49354 379 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 SCAPQ12770 1279 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 TWF1Q12792 350 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 ARL13BQ3SXY8 428 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 PPP6R3Q5H9R7 873 aaPredicted RBP18.27■□□□□ 0.52
PSEN1-206ENST00000553447 EFHC2Q5JST6 749 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 PLPP4Q5VZY2 271 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 TTC27Q6P3X3 843 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 HDAC7Q8WUI4 952 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 FAF2Q96CS3 445 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 RUNDC3BQ96NL0 473 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 RNF157Q96PX1 679 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 PARD6BQ9BYG5 372 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 UBE2OQ9C0C9 1292 aaKnown RBP18.27■□□□□ 0.52
PSEN1-206ENST00000553447 WDCPQ9H6R7 721 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 TMPRSS4Q9NRS4 437 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.27■□□□□ 0.52
PSEN1-206ENST00000553447 TMEM51Q9NW97 253 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 PCYOX1Q9UHG3 505 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 SFMBT1Q9UHJ3 866 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 NUDT5Q9UKK9 219 aa18.27■□□□□ 0.52
PSEN1-206ENST00000553447 ATG2AQ2TAZ0 1938 aa18.27■□□□□ 0.51
PSEN1-206ENST00000553447 DENND4CQ5VZ89 1909 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 C2orf71A6NGG8 1288 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 EPHB3P54753 998 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 SLC7A5Q01650 507 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 PLD1Q13393 1074 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 DHX34Q14147 1143 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 TFDP2Q14188 446 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 CCNG2Q16589 344 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 ANKRD20A8PQ5CZ79 823 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 LILRA6Q6PI73 481 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 CCDC137Q6PK04 289 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 MAATS1Q7Z4T9 603 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 MRPL43Q8N983 215 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 ATG4AQ8WYN0 398 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 RUBCNQ92622 972 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 TRMT2BQ96GJ1 504 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 MYRFLQ96LU7 910 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 SERPINB11Q96P15 392 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 TGS1Q96RS0 853 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 MAK16Q9BXY0 300 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 MAGEB5Q9BZ81 275 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 ANLNQ9NQW6 1124 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 OLA1Q9NTK5 396 aaKnown RBP18.26■□□□□ 0.51
PSEN1-206ENST00000553447 STIM2Q9P246 746 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms