RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 EFHC1Q5JVL4 640 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 NAIF1Q69YI7 327 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 ASTLQ6HA08 431 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 ZNF852Q6ZMS4 543 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 Q6ZNB5 142 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 RALGPS2Q86X27 583 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 XYLT1Q86Y38 959 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 DEFB106AQ8N104 65 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 TMEM105Q8N8V8 129 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 SLC30A5Q8TAD4 765 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 ADAM32Q8TC27 787 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 FAM3CQ92520 227 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 SYT11Q9BT88 431 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 POPDC2Q9HBU9 364 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 ASNSD1Q9NWL6 643 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 AIPL1Q9NZN9 384 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 FAM170BA6NMN3 283 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 GOLGA8SH3BPF8 625 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 SKILP12757 684 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 UNGP13051 313 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-226ENST00000553011 CLCN5P51795 746 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 PON2Q15165 354 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 TRIP4Q15650 581 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-226ENST00000553011 CLEC16AQ2KHT3 1053 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 GAB4Q2WGN9 574 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 LY6G5CQ5SRR4 150 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 RHBDF2Q6PJF5 856 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 MMS22LQ6ZRQ5 1243 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 BEND5Q7L4P6 421 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 SLC26A9Q7LBE3 791 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 TAC4Q86UU9 113 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 VSTM4Q8IW00 320 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 CCDC105Q8IYK2 499 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 MSANTD4Q8NCY6 345 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 PJA1Q8NG27 643 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 PLD4Q96BZ4 506 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 OTUB2Q96DC9 234 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 MSANTD3Q96H12 275 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 SLC2A13Q96QE2 648 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 HAUS4Q9H6D7 363 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 CAPN11Q9UMQ6 739 aa14.73□□□□□ -0.05
PTCH1-226ENST00000553011 HBS1LQ9Y450 684 aaKnown RBP14.73□□□□□ -0.05
PTCH1-226ENST00000553011 HSF2BPO75031 334 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 DAB1O75553 588 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 DCNP07585 359 aaKnown RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 GLI1P08151 1106 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 TNFAIP3P21580 790 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 MMP8P22894 467 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 AVPR2P30518 371 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 CASP14P31944 242 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 PRKCIP41743 596 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 RNASE9P60153 205 aaKnown RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 ZBED6P86452 979 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 CENPCQ03188 943 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 KLHL30Q0D2K2 578 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 NR1H3Q13133 447 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 DCAF6Q58WW2 860 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 ZNF571Q7Z3V5 609 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 PHLDB2Q86SQ0 1253 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 TMEM25Q86YD3 366 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 ZDHHC17Q8IUH5 632 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 DENND1CQ8IV53 801 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 ZNF687Q8N1G0 1237 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 ZNF397Q8NF99 534 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 IQCDQ96DY2 449 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 TRIM62Q9BVG3 475 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 DCLK3Q9C098 648 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 AGO1Q9UL18 857 aaKnown RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 MRPS17Q9Y2R5 130 aaKnown RBP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 SIT1Q9Y3P8 196 aa14.72□□□□□ -0.05
PTCH1-226ENST00000553011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTCH1-226ENST00000553011 TRUB2O95900 331 aaKnown RBP14.71□□□□□ -0.05
PTCH1-226ENST00000553011 ADH1CP00326 375 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 IGLV3-27P01718 113 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 ADH5P11766 374 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 OPRD1P41143 372 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 NSFP46459 744 aaKnown RBP14.71□□□□□ -0.05
PTCH1-226ENST00000553011 TBX4P57082 545 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 PTP4A2Q12974 167 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 FZD5Q13467 585 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 TPGS1Q6ZTW0 290 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 C12orf40Q86WS4 652 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 FCRL2Q96LA5 508 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-226ENST00000553011 SERPINB11Q96P15 392 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 NELL2Q99435 816 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 TRIM5Q9C035 493 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 FBRSL1Q9HCM7 1045 aaKnown RBP14.71□□□□□ -0.05
PTCH1-226ENST00000553011 SPHK2Q9NRA0 654 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 TAS2R14Q9NYV8 317 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 ZNF510Q9Y2H8 683 aa14.71□□□□□ -0.05
PTCH1-226ENST00000553011 LUC7L2Q9Y383 392 aaKnown RBP14.71□□□□□ -0.05
PTCH1-226ENST00000553011 SYNJ2BP-COX16A0A087WUM0 186 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 IRAK2O43187 625 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 GJB6O95452 261 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 IGLV3-25P01717 112 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms