RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SCAMP3O14828 347 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 DAB1O75553 588 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 LATS1O95835 1130 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 IGLV3-27P01718 113 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 FYNP06241 537 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 NCAM1P13591 858 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 TARSP26639 723 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 CORO1AP31146 461 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 GJA4P35212 333 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 PRKCIP41743 596 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 MAGEA9P43362 315 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 VCPP55072 806 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 YWHAZP63104 245 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 CENPCQ03188 943 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 NR1H3Q13133 447 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 TRIM14Q14142 442 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 TRIP4Q15650 581 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 ASIC2Q16515 512 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 SFMBT2Q5VUG0 894 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 E4F1Q66K89 784 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 ERICH1Q86X53 443 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 ZNF397Q8NF99 534 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 EXOC4Q96A65 974 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 CHFRQ96EP1 664 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 SERPINB11Q96P15 392 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 SLC2A13Q96QE2 648 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 NELL2Q99435 816 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 SYT11Q9BT88 431 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 LINC00597Q9H2U6 94 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 AIPL1Q9NZN9 384 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 CACNA1HO95180 2353 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 STK25O00506 426 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 CAPN9O14815 690 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 HOXC11O43248 304 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 MSI1O43347 362 aaKnown RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 IGLV3-25P01717 112 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 GYPCP04921 128 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 ADH5P11766 374 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 CD72P21854 359 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 MMP8P22894 467 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 NSFP46459 744 aaKnown RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 RPS9P46781 194 aaKnown RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 NUBP1P53384 320 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 GSCP56915 257 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 SLC6A3Q01959 620 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 RING1Q06587 406 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 DHCR24Q15392 516 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 CLEC16AQ2KHT3 1053 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 GAB4Q2WGN9 574 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 NUGGCQ68CJ6 796 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 OR6B2Q6IFH4 312 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 PPP1R2P3Q6NXS1 205 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 TXNDC11Q6PKC3 985 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 SARM1Q6SZW1 724 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 IRF2BP2Q7Z5L9 587 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 XYLT1Q86Y38 959 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 FAM217AQ8IXS0 508 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 ADGRG2Q8IZP9 1017 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 TMEM105Q8N8V8 129 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 OLIG1Q8TAK6 271 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 TTC8Q8TAM2 541 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 CPA5Q8WXQ8 436 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 SYN2Q92777 582 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 C18orf8Q96DM3 657 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 SPHK2Q9NRA0 654 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 SFMBT1Q9UHJ3 866 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 NAALADL1Q9UQQ1 740 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 SIT1Q9Y3P8 196 aa12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 MUC22E2RYF6 1773 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-209ENST00000552896 FAM170BA6NMN3 283 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 TRDMT1O14717 391 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 NCAM2O15394 837 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 IRAK2O43187 625 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 KLKB1P03952 638 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 HMBSP08397 361 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 AVPR2P30518 371 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 EIF2DP41214 584 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 HARS2P49590 506 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 ZBED6P86452 979 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 LRRC32Q14392 662 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 PON2Q15165 354 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 TAF5Q15542 800 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 LY6G5CQ5SRR4 150 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 FAM102AQ5T9C2 384 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 SYPL2Q5VXT5 272 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 CPXM2Q8N436 756 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 CLDN23Q96B33 292 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms