RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ZNF134P52741 427 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 MYO1EQ12965 1108 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 TRPC3Q13507 836 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 FAM110CQ1W6H9 321 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 LRIT3Q3SXY7 679 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 L1TD1Q5T7N2 865 aaKnown RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 MANEALQ5VSG8 457 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 CST9Q5W186 159 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 SLFN13Q68D06 897 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 RRAGAQ7L523 313 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 LRRTM4Q86VH4 590 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 ANKRD35Q8N283 1001 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 OR6Y1Q8NGX8 325 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 SCAMP5Q8TAC9 235 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 DNAJB14Q8TBM8 379 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 CPT1CQ8TCG5 803 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 ASB12Q8WXK4 309 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 GOLGA1Q92805 767 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 RILPL2Q969X0 211 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 C3orf49Q96BT1 292 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 MIEF2Q96C03 454 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 COG8Q96MW5 612 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 HIST1H2AAQ96QV6 131 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 MED15Q96RN5 788 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 ZCWPW1Q9H0M4 648 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 TP63Q9H3D4 680 aaPredicted RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 SMOC2Q9H3U7 446 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 EPHX3Q9H6B9 360 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 GBA2Q9HCG7 927 aaPredicted RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 GGA3Q9NZ52 723 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 DNMT3BQ9UBC3 853 aaKnown RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 DNAJB11Q9UBS4 358 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 EIF2B4Q9UI10 523 aaKnown RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 FBXO2Q9UK22 296 aaPredicted RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 NEU2Q9Y3R4 380 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 ANKRD17O75179 2603 aaKnown RBP6.02□□□□□ -1.45
CPSF6-206ENST00000550987 XIRP2A4UGR9 3374 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 TEP1Q99973 2627 aaKnown RBP6.01□□□□□ -1.45
CPSF6-206ENST00000550987 PNMA6EA0A0J9YXQ4 647 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 NPEPPSL1A6NEC2 478 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 B9A039 149 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 KCNA3P22001 575 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 MST1P26927 711 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 FPGSQ05932 587 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 SLC12A1Q13621 1099 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 PKN1Q16512 942 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 PTCHD3Q3KNS1 767 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 ZIK1Q3SY52 487 aaPredicted RBP6.01□□□□□ -1.45
CPSF6-206ENST00000550987 HYIQ5T013 277 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 ARHGAP40Q5TG30 622 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 RAB11FIP2Q7L804 512 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 RHOT2Q8IXI1 618 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 SLC15A3Q8IY34 581 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.01□□□□□ -1.45
CPSF6-206ENST00000550987 POC1BQ8TC44 478 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 CSGALNACT1Q8TDX6 532 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 ZNF668Q96K58 619 aaPredicted RBP6.01□□□□□ -1.45
CPSF6-206ENST00000550987 FAM227BQ96M60 508 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 ELAC1Q9H777 363 aaKnown RBP6.01□□□□□ -1.45
CPSF6-206ENST00000550987 WASH6PQ9NQA3 447 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 LPAR3Q9UBY5 353 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 CFDP1Q9UEE9 299 aaPredicted RBP6.01□□□□□ -1.45
CPSF6-206ENST00000550987 FEM1BQ9UK73 627 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 USP22Q9UPT9 525 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 SCINQ9Y6U3 715 aa6.01□□□□□ -1.45
CPSF6-206ENST00000550987 NAIPQ13075 1403 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 DNAH14Q0VDD8 3507 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 A0A1B0GTW7 788 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 MED19A0JLT2 244 aaPredicted RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 A6NLC8 198 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 J3KTA2 159 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 LAMTOR5O43504 91 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 FAM155BO75949 473 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 DDNO94850 711 aaPredicted RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 KRT1P04264 644 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 ANXA6P08133 673 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 KCNA2P16389 499 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 SLC5A2P31639 672 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 TOB1P50616 345 aaPredicted RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 EPHB4P54760 987 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 ACTR2P61160 394 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 HSD11B2P80365 405 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 FOXL1Q12952 345 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 ATP1A4Q13733 1029 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 CCNIQ14094 377 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 DLGAP5Q15398 846 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 P3H1Q32P28 736 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 DCAF17Q5H9S7 520 aaPredicted RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 SFRP4Q6FHJ7 346 aaPredicted RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 CLNKQ7Z7G1 428 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 SYT12Q8IV01 421 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 NME8Q8N427 588 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 OR56A1Q8NGH5 318 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 OR1N1Q8NGS0 311 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 ATRIPQ8WXE1 791 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 THAP4Q8WY91 577 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 RSC1A1Q92681 617 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 HDAC2Q92769 488 aaKnown RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 LRIG1Q96JA1 1093 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 TRIM5Q9C035 493 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms