RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 TTC22Q5TAA0 569 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 RAB11FIP2Q7L804 512 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 NRSN1Q8IZ57 195 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 ANKRD52Q8NB46 1076 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 ZNF622Q969S3 477 aaKnown RBP eCLIP6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 ZUFSPQ96AP4 578 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 BORCS6Q96GS4 357 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 C7orf26Q96N11 449 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 MOGAT1Q96PD6 335 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 TREX2Q9BQ50 279 aaPredicted RBP6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 SGPP1Q9BX95 441 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 GPR63Q9BZJ6 419 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 VPS16Q9H269 839 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 G6PC2Q9NQR9 355 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 ETAA1Q9NY74 926 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 HPSEQ9Y251 543 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 CDY1Q9Y6F8 540 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 ZNF541Q9H0D2 1346 aa6.87□□□□□ -1.31
TGFBR1-208ENST00000550253 CAMTA2O94983 1202 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 SRGAP2BP0DMP2 458 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 RPS6KB1P23443 525 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 PIP4K2AP48426 406 aaPredicted RBP6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 LRP8Q14114 963 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 GRM4Q14833 912 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 CSRP2Q16527 193 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 CCDC96Q2M329 555 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 VWA3BQ502W6 1294 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 ICE2Q659A1 982 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 NFRKBQ6P4R8 1299 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 XYLT1Q86Y38 959 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 CEP70Q8NHQ1 597 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TBC1D15Q8TC07 691 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 SLC46A1Q96NT5 459 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 SLC46A2Q9BY10 475 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TMEM168Q9H0V1 697 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 SLC25A32Q9H2D1 315 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 GCM1Q9NP62 436 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TMOD4Q9NZQ9 345 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 PI4KBQ9UBF8 816 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 HEG1Q9ULI3 1381 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 SNED1Q8TER0 1413 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 ZNF503-AS2A6NEH8 195 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 PGPEP1LA6NFU8 196 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TMCC2O75069 709 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 VPS4BO75351 444 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 PIAS2O75928 621 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 VIPP01282 170 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 CNPP09543 421 aaKnown RBP6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 RAD52P43351 418 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 BTBD16Q32M84 506 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 FAM214AQ32MH5 1076 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 ATXN7L2Q5T6C5 722 aaPredicted RBP6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 ACAD10Q6JQN1 1059 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 RINT1Q6NUQ1 792 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 CBLL1Q75N03 491 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 GPRIN1Q7Z2K8 1008 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TMEFF1Q8IYR6 380 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 KLHL36Q8N4N3 616 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TDRD7Q8NHU6 1098 aaKnown RBP6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 NUP133Q8WUM0 1156 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TTYH3Q9C0H2 523 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TAOK3Q9H2K8 898 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 ARHGAP26Q9UNA1 814 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 TTLL3Q9Y4R7 772 aa6.86□□□□□ -1.31
TGFBR1-208ENST00000550253 CLSPNQ9HAW4 1339 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 FSD2A1L4K1 749 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 PMS2P1A4D2B8 440 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 J3KTA2 159 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 ORC4O43929 436 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 PRSS23O95084 383 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 RTN3O95197 1032 aaPredicted RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 HNRNPA1P09651 372 aaKnown RBP eCLIP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 ATXN1P54253 815 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 KRT32Q14532 448 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 SMAD1Q15797 465 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 MGAT5BQ3V5L5 792 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 WDR45BQ5MNZ6 344 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 FAM205BPQ63HN1 556 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 ABLIM2Q6H8Q1 611 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 ZNF790Q6PG37 636 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 GALNT5Q7Z7M9 940 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 C3orf49Q96BT1 292 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 REEP2Q9BRK0 252 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 LSM14BQ9BX40 385 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 TLR10Q9BXR5 811 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 ELAC1Q9H777 363 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 PRKRIP1Q9H875 184 aaPredicted RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 CHODLQ9H9P2 273 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 KCNK12Q9HB15 430 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 BARX1Q9HBU1 254 aaPredicted RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 FSCN3Q9NQT6 498 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 PCMTD2Q9NV79 361 aa6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 C19orf53Q9UNZ5 99 aaPredicted RBP6.85□□□□□ -1.31
TGFBR1-208ENST00000550253 E7EVH7 732 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 TRIM13O60858 407 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms