RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PGAP3Q96FM1 320 aaPredicted RBP12.44□□□□□ -0.42
PFDN5-208ENST00000549995 MRFAP1L1Q96HT8 127 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 DNAJC7Q99615 494 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 HEBP1Q9NRV9 189 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 SMPD4Q9NXE4 827 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 GTSE1Q9NYZ3 720 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 DLGAP2Q9P1A6 1054 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 WDR35Q9P2L0 1181 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 RASAL2Q9UJF2 1139 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 TMEM59LQ9UK28 342 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 NENFQ9UMX5 172 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 BZW2Q9Y6E2 419 aaKnown RBP12.44□□□□□ -0.42
PFDN5-208ENST00000549995 WNT6Q9Y6F9 365 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 PIAS3Q9Y6X2 628 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 MYOFQ9NZM1 2061 aa12.44□□□□□ -0.42
PFDN5-208ENST00000549995 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 SPECC1L-ADORA2AF8WAN1 911 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 IRAK2O43187 625 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 HOXC11O43248 304 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 KLKB1P03952 638 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 ARSAP15289 507 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 GJA4P35212 333 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 EIF2DP41214 584 aaKnown RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 MAGEA9P43362 315 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TNK2Q07912 1038 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 FZD5Q13467 585 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TAF5Q15542 800 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 OTUD1Q5VV17 481 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TPRG1Q6ZUI0 275 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 ZNF571Q7Z3V5 609 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 BBS7Q8IWZ6 715 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 PJA1Q8NG27 643 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 RNF139Q8WU17 664 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 EDEM1Q92611 657 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 CLDN23Q96B33 292 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 VCPIP1Q96JH7 1222 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 SERPINB11Q96P15 392 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 NELL2Q99435 816 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 LRFN3Q9BTN0 628 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 NACA2Q9H009 215 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 PDCL3Q9H2J4 239 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 LINC00597Q9H2U6 94 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 EBF3Q9H4W6 596 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 HAUS4Q9H6D7 363 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TBC1D17Q9HA65 648 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 LTB4R2Q9NPC1 389 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 FBXL21Q9UKT6 434 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 CA14Q9ULX7 337 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 NAALADL1Q9UQQ1 740 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TLR6Q9Y2C9 796 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 LUC7L2Q9Y383 392 aaKnown RBP12.43□□□□□ -0.42
PFDN5-208ENST00000549995 SH3BP1Q9Y3L3 701 aa12.43□□□□□ -0.42
PFDN5-208ENST00000549995 TRDMT1O14717 391 aaKnown RBP12.42□□□□□ -0.42
PFDN5-208ENST00000549995 ENDOD1O94919 500 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 NCAM1P13591 858 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 CASP14P31944 242 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 NOS2P35228 1153 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 MATKP42679 507 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 RPS9P46781 194 aaKnown RBP12.42□□□□□ -0.42
PFDN5-208ENST00000549995 DHCR24Q15392 516 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 OR6B2Q6IFH4 312 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 RHBDF2Q6PJF5 856 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 TXNDC11Q6PKC3 985 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 ZNF852Q6ZMS4 543 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 TAC4Q86UU9 113 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 ETFBKMTQ8IXQ9 262 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 CCDC105Q8IYK2 499 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 CPA5Q8WXQ8 436 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 FCRL2Q96LA5 508 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-208ENST00000549995 NPY6RQ99463 290 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 IER2Q9BTL4 223 aa12.42□□□□□ -0.42
PFDN5-208ENST00000549995 AGO1Q9UL18 857 aaKnown RBP12.42□□□□□ -0.42
PFDN5-208ENST00000549995 MUC22E2RYF6 1773 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-208ENST00000549995 A0A0A0MRY4 1105 aa12.41□□□□□ -0.42
PFDN5-208ENST00000549995 SLC12A8A0AV02 714 aa12.41□□□□□ -0.42
PFDN5-208ENST00000549995 DDX3XO00571 662 aaKnown RBP eCLIP12.41□□□□□ -0.426e-6■■■■■ 29.2
PFDN5-208ENST00000549995 TRUB2O95900 331 aaKnown RBP12.41□□□□□ -0.42
PFDN5-208ENST00000549995 PENKP01210 267 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-208ENST00000549995 SERPING1P05155 500 aa12.41□□□□□ -0.42
PFDN5-208ENST00000549995 CALB1P05937 261 aa12.41□□□□□ -0.42
PFDN5-208ENST00000549995 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-208ENST00000549995 TARSP26639 723 aaKnown RBP12.41□□□□□ -0.42
PFDN5-208ENST00000549995 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
PFDN5-208ENST00000549995 OPRD1P41143 372 aa12.41□□□□□ -0.42
PFDN5-208ENST00000549995 NSFP46459 744 aaKnown RBP12.41□□□□□ -0.42
PFDN5-208ENST00000549995 AMPD2Q01433 879 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms