RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CACNA2D2Q9NY47 1150 aa14.29□□□□□ -0.12
TROAP-211ENST00000549891 SERTAD1Q9UHV2 236 aa14.29□□□□□ -0.12
TROAP-211ENST00000549891 NAGPAQ9UK23 515 aa14.29□□□□□ -0.12
TROAP-211ENST00000549891 NFE2L3Q9Y4A8 694 aa14.29□□□□□ -0.12
TROAP-211ENST00000549891 A0A1W2PQH9 124 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 SRRM3A6NNA2 597 aaPredicted RBP14.28□□□□□ -0.12
TROAP-211ENST00000549891 HHLA1C9JL84 531 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 MAPK13O15264 365 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 F13A1P00488 732 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 CISD3P0C7P0 127 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 CD6P30203 668 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 VAMP7P51809 220 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 COG7P83436 770 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
TROAP-211ENST00000549891 SPOPLQ6IQ16 392 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
TROAP-211ENST00000549891 Q6ZNB5 142 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 INTS8Q75QN2 995 aaKnown RBP14.28□□□□□ -0.12
TROAP-211ENST00000549891 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 METTL3Q86U44 580 aaKnown RBP14.28□□□□□ -0.12
TROAP-211ENST00000549891 PAGE5Q96GU1 130 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 DCLK3Q9C098 648 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 NMUR1Q9HB89 426 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 CLIC5Q9NZA1 410 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 USP25Q9UHP3 1055 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 FBXO10Q9UK96 956 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 RALYQ9UKM9 306 aaKnown RBP14.28□□□□□ -0.12
TROAP-211ENST00000549891 KLK13Q9UKR3 277 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 PCDHB9Q9Y5E1 797 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 RAD54BQ9Y620 910 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 SPEGQ15772 3267 aa14.28□□□□□ -0.12
TROAP-211ENST00000549891 CACNA1GO43497 2377 aa14.27□□□□□ -0.12
TROAP-211ENST00000549891 FAM221BA6H8Z2 402 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 ACTN4O43707 911 aaKnown RBP14.27□□□□□ -0.13
TROAP-211ENST00000549891 STC2O76061 302 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 KRT13P13646 458 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 CD59P13987 128 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 KIF11P52732 1056 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 ENPEPQ07075 957 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 TTC39CQ8N584 583 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 BHMTQ93088 406 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 CCDC47Q96A33 483 aaKnown RBP14.27□□□□□ -0.13
TROAP-211ENST00000549891 DUSP16Q9BY84 665 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 PRDM16Q9HAZ2 1276 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 PLK2Q9NYY3 685 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 NUDT5Q9UKK9 219 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 TRAF3IP3Q9Y228 551 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 STON1Q9Y6Q2 735 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 CKAP5Q14008 2032 aa14.27□□□□□ -0.13
TROAP-211ENST00000549891 A0A1B0GTW7 788 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 MEI4A8MW99 385 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 MDM4O15151 490 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 SYNCRIPO60506 623 aaKnown RBP14.26□□□□□ -0.13
TROAP-211ENST00000549891 CILPO75339 1184 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 PENKP01210 267 aaPredicted RBP14.26□□□□□ -0.13
TROAP-211ENST00000549891 CYBBP04839 570 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 CD58P19256 250 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 OXTRP30559 389 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 TRIP6Q15654 476 aaKnown RBP14.26□□□□□ -0.13
TROAP-211ENST00000549891 ARHGAP18Q8N392 663 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 CADM4Q8NFZ8 388 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 OR2I1PQ8NGU4 316 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 ERLEC1Q96DZ1 483 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 USP36Q9P275 1121 aaKnown RBP14.26□□□□□ -0.13
TROAP-211ENST00000549891 RCOR1Q9UKL0 485 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 USP3Q9Y6I4 520 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 DMXL2Q8TDJ6 3036 aa14.26□□□□□ -0.13
TROAP-211ENST00000549891 WASH3PC4AMC7 463 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 NCAM1P13591 858 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 NR2F2P24468 414 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 RPL13P26373 211 aaKnown RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 CORO1AP31146 461 aaKnown RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 GCLMP48507 274 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 MFAP3P55082 362 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 SLC8A3P57103 927 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 EIF4HQ15056 248 aaKnown RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 NFIL3Q16649 462 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 FUT11Q495W5 492 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 C1orf220Q5T0J3 134 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 PPP1R26Q5T8A7 1209 aaPredicted RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 FYB2Q5VWT5 728 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 ANKS1BQ7Z6G8 1248 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 RAB44Q7Z6P3 723 aaPredicted RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 NAXDQ8IW45 347 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 CHCHD4Q8N4Q1 142 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 TAS1R2Q8TE23 839 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 DNASE2BQ8WZ79 361 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 SNX21Q969T3 373 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 TOE1Q96GM8 510 aaKnown RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 FAXDC2Q96IV6 333 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 SLC6A17Q9H1V8 727 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 ITM2CQ9NQX7 267 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 WSB2Q9NYS7 404 aaPredicted RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 THAP10Q9P2Z0 257 aaPredicted RBP14.25□□□□□ -0.13
TROAP-211ENST00000549891 RASAL2Q9UJF2 1139 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 STRIP2Q9ULQ0 834 aa14.25□□□□□ -0.13
TROAP-211ENST00000549891 SH3BP5O60239 455 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms