RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 KCNA5P22460 613 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 CCR1P32246 355 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 RFC1P35251 1148 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 LTBRP36941 435 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 HARS2P49590 506 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 SULT1E1P49888 294 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 CDR1P51861 262 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 DEUP1Q05D60 604 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 PPP2R5DQ14738 602 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TRIP4Q15650 581 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 ODF2Q5BJF6 829 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 C11orf63Q6NUN7 778 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 CMTM8Q8IZV2 173 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 CELF5Q8N6W0 485 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 C12orf76Q8N812 135 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 CLEC4CQ8WTT0 213 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 RNF34Q969K3 372 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 AZIN2Q96A70 460 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 OTUB2Q96DC9 234 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TBCBQ99426 244 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 NPY6RQ99463 290 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 DESI2Q9BSY9 194 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 KCNF1Q9H3M0 494 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TRPV4Q9HBA0 871 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TDP1Q9NUW8 608 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 HCFC1R1Q9NWW0 138 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TJP2Q9UDY2 1190 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 RASAL2Q9UJF2 1139 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 USP15Q9Y4E8 981 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■□□□□ 9
SMARCD1-206ENST00000549274 MIF4GDA9UHW6 222 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 M0QYT0 321 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 COCHO43405 550 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 MBTPS2O43462 519 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 PRPSAP2O60256 369 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 GRAP2O75791 330 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 PROSCO94903 275 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 ENDOD1O94919 500 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 IGLV3-25P01717 112 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 KRT7P08729 469 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 GBP2P32456 591 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 HTR7P34969 479 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 FLT3P36888 993 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 CETN2P41208 172 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC11A2P49281 568 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 TBX4P57082 545 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 CYP4F8P98187 520 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 EFEMP1Q12805 493 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 TEAD2Q15562 447 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 DAAM2Q86T65 1068 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 TMEM150AQ86TG1 271 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 MAB21L3Q8N8X9 362 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 ZNF557Q8N988 423 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 TDRD5Q8NAT2 981 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 KIAA1524Q8TCG1 905 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 DQX1Q8TE96 717 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 DEPDC1BQ8WUY9 529 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 EDEM1Q92611 657 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 CENPIQ92674 756 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 FGF13Q92913 245 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 SMARCD2Q92925 531 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 NTAN1Q96AB6 310 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 ARHGEF26Q96DR7 871 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 PHF7Q9BWX1 381 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 PACSIN1Q9BY11 444 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 RETREG1Q9H6L5 497 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 NMUR1Q9HB89 426 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 TBC1D14Q9P2M4 693 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 THEGQ9P2T0 379 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 PRKAG3Q9UGI9 489 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 ZKSCAN5Q9Y2L8 839 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 REXO2Q9Y3B8 237 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 SH3BP1Q9Y3L3 701 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 DOCK8Q8NF50 2099 aa10.17□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC12A8A0AV02 714 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 E2F8A0AVK6 867 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 TYW5A2RUC4 315 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 KIF2AO00139 706 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 SPOPO43791 374 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 CEBPBP17676 345 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 CHKAP35790 457 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 CLCN6P51797 869 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 RPL7AP62424 266 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 RBM10P98175 930 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 SMAD2Q15796 467 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 CCDC14Q49A88 953 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 BOLA3Q53S33 107 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 C2CD6Q53TS8 623 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 EFHC2Q5JST6 749 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 LRRC38Q5VT99 294 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 TXNDC8Q6A555 127 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 HFE2Q6ZVN8 426 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms