RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CD6P30203 668 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 IL12RB1P42701 662 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 ME1P48163 572 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 AP3M2P53677 418 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 GRIK2Q13002 908 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 FUT11Q495W5 492 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 ZNF394Q53GI3 561 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 WDR45BQ5MNZ6 344 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 RAB44Q7Z6P3 723 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 FAM124AQ86V42 546 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 NAXDQ8IW45 347 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 ZCCHC9Q8N567 271 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 SORCS1Q8WY21 1168 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 FAM124BQ9H5Z6 455 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 DNAAF2Q9NVR5 837 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 KLRC4O43908 158 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 YEATS4O95619 227 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 KLKB1P03952 638 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 NR3C1P04150 777 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 ZSCAN22P10073 491 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 NCAM1P13591 858 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 PDIA4P13667 645 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 ASPAP45381 313 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 CLDN10P78369 228 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 EFEMP1Q12805 493 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 STARD3Q14849 445 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 ZNF423Q2M1K9 1284 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 ZACNQ401N2 412 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 SCD5Q86SK9 330 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 SLCO6A1Q86UG4 719 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 UNC93AQ86WB7 457 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 MARCH9Q86YJ5 346 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 TMPRSS6Q8IU80 811 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 KIAA0895Q8NCT3 520 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 HNRNPABQ99729 332 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 MKRN2Q9H000 416 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 GAREM1Q9H706 876 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 DMAC2Q9NW81 257 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 WSB2Q9NYS7 404 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 SUSD2Q9UGT4 822 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 EIF2B4Q9UI10 523 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 CLEC4EQ9ULY5 219 aa12.57□□□□□ -0.4
TRAFD1-205ENST00000548277 CEP295Q9C0D2 2601 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 A0A1B0GTW7 788 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 GFRA2O00451 464 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 SYNCRIPO60506 623 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 GJB3O75712 270 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 F13A1P00488 732 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 RALAP11233 206 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 TRIM21P19474 475 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 CORO1AP31146 461 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 GCLMP48507 274 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 VAMP7P51809 220 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 HNRNPDQ14103 355 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 ZNF234Q14588 700 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 CCDC157Q569K6 752 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 Q6ZNB5 142 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 PROSER1Q86XN7 944 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 DENND1CQ8IV53 801 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 GOLGA5Q8TBA6 731 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 MDM1Q8TC05 714 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 UCMAQ8WVF2 138 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 HNRNPLLQ8WVV9 542 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 SNX19Q92543 992 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 SIPA1Q96FS4 1042 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 HEXIM2Q96MH2 286 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 DUSP9Q99956 384 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 NT5C1AQ9BXI3 368 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 CIPCQ9C0C6 399 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 KCTD10Q9H3F6 313 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 MAGEF1Q9HAY2 307 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 MAPK8IP1Q9UQF2 711 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 SPEGQ15772 3267 aa12.56□□□□□ -0.4
TRAFD1-205ENST00000548277 BAHCC1Q9P281 2608 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 SLC12A8A0AV02 714 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 KCNK3O14649 394 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 TSPAN3O60637 253 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 EPHX1P07099 455 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 ACADMP11310 421 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 HLA-EP13747 358 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 TPMTP51580 245 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms