RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 BBS2Q9BXC9 721 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 STK33Q9BYT3 514 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 FBXO4Q9UKT5 387 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 R4GN57 208 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 CACNA1HO95180 2353 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.35□□□□□ -0.43
RAB5C-204ENST00000547517 NCAM1P13591 858 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 EIF2DP41214 584 aaKnown RBP12.35□□□□□ -0.43
RAB5C-204ENST00000547517 CXCL12P48061 93 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 MESP2Q0VG99 397 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 PPP2R5DQ14738 602 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 FBXO43Q4G163 708 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 NOP9Q86U38 636 aaKnown RBP12.35□□□□□ -0.43
RAB5C-204ENST00000547517 SFTPA1Q8IWL2 248 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 WDTC1Q8N5D0 677 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 RPLP0P6Q8NHW5 317 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 PIWIL1Q96J94 861 aaKnown RBP12.35□□□□□ -0.43
RAB5C-204ENST00000547517 PPP1R13BQ96KQ4 1090 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 SPAG5Q96R06 1193 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 PNKPQ96T60 521 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 DCLK3Q9C098 648 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 SYNCQ9H7C4 482 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 ARHGEF4Q9NR80 690 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
RAB5C-204ENST00000547517 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
RAB5C-204ENST00000547517 HBS1LQ9Y450 684 aaKnown RBP12.35□□□□□ -0.43
RAB5C-204ENST00000547517 LRRC10BA6NIK2 292 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 CAPN9O14815 690 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 TULP3O75386 442 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 KAT7O95251 611 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ERBB2P04626 1255 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 APODP05090 189 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 FYNP06241 537 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 MMEP08473 750 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 TYRP14679 529 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 SOX5P35711 763 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 NBL1P41271 181 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
RAB5C-204ENST00000547517 JAM2P57087 298 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 IQCB1Q15051 598 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 TRIP4Q15650 581 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 PTPN20Q4JDL3 420 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
RAB5C-204ENST00000547517 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 TMEM110Q86TL2 294 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 TAC4Q86UU9 113 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 LUZP1Q86V48 1076 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ETFBKMTQ8IXQ9 262 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ADAM32Q8TC27 787 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 DQX1Q8TE96 717 aaKnown RBP12.34□□□□□ -0.43
RAB5C-204ENST00000547517 SLC20A1Q8WUM9 679 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 DNAJC17Q9NVM6 304 aaKnown RBP12.34□□□□□ -0.43
RAB5C-204ENST00000547517 PLK2Q9NYY3 685 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 MARK1Q9P0L2 795 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 ZNF510Q9Y2H8 683 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 DAAM1Q9Y4D1 1078 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 MYO15AQ9UKN7 3530 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
RAB5C-204ENST00000547517 MYOFQ9NZM1 2061 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 ANTXRLA6NF34 631 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 K7EQS6 105 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TRIM24O15164 1050 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TEX33O43247 280 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 CACNG3O60359 315 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TDGF1P13385 188 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 STAT1P42224 750 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TBX4P57082 545 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TPM4P67936 248 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TAF5Q15542 800 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 SKOR2Q2VWA4 1001 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 FILIP1LQ4L180 1135 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 OLFML1Q6UWY5 402 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 MAMSTRQ6ZN01 415 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 ALYREFQ86V81 257 aaKnown RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 PHTF2Q8N3S3 785 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 TMEM35BQ8NCS4 154 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 DDX1Q92499 740 aaKnown RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 ACDQ96AP0 544 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 POPDC2Q9HBU9 364 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 POLR3BQ9NW08 1133 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 DEC1Q9P2X7 70 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 NOCTQ9UK39 431 aaKnown RBP12.33□□□□□ -0.44
RAB5C-204ENST00000547517 VPS13AQ96RL7 3174 aa12.33□□□□□ -0.44
RAB5C-204ENST00000547517 K7ESF4 209 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms