RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 PAX3P23760 479 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 GPD2P43304 727 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 ARHGAP17Q68EM7 881 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 OVOS1Q6IE37 1185 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 SLC13A5Q86YT5 568 aaPredicted RBP17.14■□□□□ 0.33
BRF1-208ENST00000546997 TNS4Q8IZW8 715 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 SYT15Q9BQS2 421 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 TJP2Q9UDY2 1190 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 DSEQ9UL01 958 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 TCP11X1B4DZS4 312 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 TYMPP19971 482 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 CALB2P22676 271 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 ADORA2BP29275 332 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 KCTD19Q17RG1 926 aaPredicted RBP17.13■□□□□ 0.33
BRF1-208ENST00000546997 PTPN20Q4JDL3 420 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 PKDCCQ504Y2 493 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 SLC30A9Q6PML9 568 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 METTL23Q86XA0 190 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 ENDOVQ8N8Q3 282 aaKnown RBP17.13■□□□□ 0.33
BRF1-208ENST00000546997 MAGEB18Q96M61 343 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 TMEM209Q96SK2 561 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 COLEC11Q9BWP8 271 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 ZNF518BQ9C0D4 1074 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 RNPEPL1Q9HAU8 725 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 FGFR1OP2Q9NVK5 253 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 ACTL7BQ9Y614 415 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 TCRBV7S2A1N4TA0A589 114 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 CLDN5O00501 218 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
BRF1-208ENST00000546997 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
BRF1-208ENST00000546997 STILQ15468 1287 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 FAM171A1Q5VUB5 890 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 FUT10Q6P4F1 479 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 PSRC1Q6PGN9 363 aaPredicted RBP17.13■□□□□ 0.33
BRF1-208ENST00000546997 FITM2Q8N6M3 262 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 SLCO2A1Q92959 643 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 CPXM1Q96SM3 734 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 PARVAQ9NVD7 372 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
BRF1-208ENST00000546997 MRPL42Q9Y6G3 142 aaKnown RBP17.13■□□□□ 0.33
BRF1-208ENST00000546997 CHD9Q3L8U1 2897 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.33
BRF1-208ENST00000546997 ATP6V1C1P21283 382 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 ABL2P42684 1182 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 RPL21P46778 160 aaKnown RBP17.12■□□□□ 0.33
BRF1-208ENST00000546997 IFNAR2P48551 515 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 ALDH7A1P49419 539 aaKnown RBP17.12■□□□□ 0.33
BRF1-208ENST00000546997 ROR2Q01974 943 aaKnown RBP17.12■□□□□ 0.33
BRF1-208ENST00000546997 SIX1Q15475 284 aaPredicted RBP17.12■□□□□ 0.33
BRF1-208ENST00000546997 WASHC2DQ5SRD0 308 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 CYP4A22Q5TCH4 519 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 SPDYE1Q8NFV5 336 aaPredicted RBP17.12■□□□□ 0.33
BRF1-208ENST00000546997 FEZF2Q8TBJ5 459 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 EPS8L3Q8TE67 593 aaKnown RBP17.12■□□□□ 0.33
BRF1-208ENST00000546997 DPF3Q92784 378 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 C18orf8Q96DM3 657 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 PCED1BQ96HM7 432 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 YME1L1Q96TA2 773 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 MTUS1Q9ULD2 1270 aa17.12■□□□□ 0.33
BRF1-208ENST00000546997 LRRD1A4D1F6 860 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 FSCN2O14926 492 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 GJB5O95377 273 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 LMNAP02545 664 aaKnown RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 PCSK1P29120 753 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 TTC27Q6P3X3 843 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 ARHGEF18Q6ZSZ5 1173 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 C12orf50Q8NA57 414 aaPredicted RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 PKMYT1Q99640 499 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 ACBD6Q9BR61 282 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 VN1R3Q9BXE9 311 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
BRF1-208ENST00000546997 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 ARHGEF37A1IGU5 675 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 SYN3O14994 580 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 CALB1P05937 261 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 ACADSP16219 412 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 PPARDQ03181 441 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 VARS2Q5ST30 1063 aaKnown RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 PMF1Q6P1K2 205 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 VSTM1Q6UX27 236 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 PPP1R21Q6ZMI0 780 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 TAS1R1Q7RTX1 841 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 ANKRD52Q8NB46 1076 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms