RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TDRD12Q587J7 1177 aaKnown RBP17.54■□□□□ 0.4
CCDC38-203ENST00000546803 DCAF6Q58WW2 860 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 FAM102AQ5T9C2 384 aaPredicted RBP17.54■□□□□ 0.4
CCDC38-203ENST00000546803 SYPL2Q5VXT5 272 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 ACAD10Q6JQN1 1059 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 Q6ZNB5 142 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 MMS22LQ6ZRQ5 1243 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 ARCQ7LC44 396 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 VPS36Q86VN1 386 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 DEFB106AQ8N104 65 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 OR8K1Q8NGG5 319 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 WBP2Q969T9 261 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 MRFAP1L1Q96HT8 127 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 C11orf70Q9BRQ4 267 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 TBC1D17Q9HA65 648 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 TMEM51Q9NW97 253 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 RRN3Q9NYV6 651 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 ADAM22Q9P0K1 906 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 NUP210Q8TEM1 1887 aaPredicted RBP17.53■□□□□ 0.4
CCDC38-203ENST00000546803 KANSL1LA0AUZ9 987 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 FAM86C2PA6NEL3 165 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 SPECC1L-ADORA2AF8WAN1 911 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 LATS1O95835 1130 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 ADH1CP00326 375 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 IGLV3-27P01718 113 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 CORO1AP31146 461 aaKnown RBP17.53■□□□□ 0.4
CCDC38-203ENST00000546803 CTHP32929 405 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 ZNF75DP51815 510 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 TBX4P57082 545 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 PTP4A2Q12974 167 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 ARID5BQ14865 1188 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 HGSNATQ68CP4 663 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 UNC45BQ8IWX7 931 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 FBXL6Q8N531 539 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 OLIG1Q8TAK6 271 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 EXOC4Q96A65 974 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 VCPIP1Q96JH7 1222 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 TLR6Q9Y2C9 796 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 NCOR1O75376 2440 aa17.53■□□□□ 0.4
CCDC38-203ENST00000546803 OBSL1O75147 1896 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 OTOL1A6NHN0 477 aaPredicted RBP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 GOLGA8SH3BPF8 625 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 STK25O00506 426 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 DDX3XO00571 662 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 SCAMP3O14828 347 aaKnown RBP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 MSI1O43347 362 aaKnown RBP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 GRAP2O75791 330 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 TRUB2O95900 331 aaKnown RBP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 IGLV3-25P01717 112 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 KLKB1P03952 638 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 GBP1P32455 592 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 CHKAP35790 457 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 MATKP42679 507 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 CLCN5P51795 746 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 DHCR24Q15392 516 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 C2CD6Q53TS8 623 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 MON1BQ7L1V2 547 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 TAC4Q86UU9 113 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 CNGA4Q8IV77 575 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 FLCNQ8NFG4 579 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 TTC8Q8TAM2 541 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 FAM3CQ92520 227 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 AZIN2Q96A70 460 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 DNAJC7Q99615 494 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 OSBPL6Q9BZF3 934 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 ZNHIT6Q9NWK9 470 aaKnown RBP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCDC38-203ENST00000546803 TMEM59LQ9UK28 342 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 STAP1Q9ULZ2 295 aa17.52■□□□□ 0.4
CCDC38-203ENST00000546803 VCANP13611 3396 aa17.52■□□□□ 0.39
CCDC38-203ENST00000546803 ZNF638Q14966 1978 aaKnown RBP17.51■□□□□ 0.39
CCDC38-203ENST00000546803 MYO10Q9HD67 2058 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 A0A0C4DFX4 3053 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 IRAK2O43187 625 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 MFAP3LO75121 409 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 PDGFBP01127 241 aaPredicted RBP17.51■□□□□ 0.39
CCDC38-203ENST00000546803 CYP17A1P05093 508 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 GJA4P35212 333 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 SOX9P48436 509 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 RNASE9P60153 205 aaKnown RBP17.51■□□□□ 0.39
CCDC38-203ENST00000546803 TBX2Q13207 712 aaPredicted RBP17.51■□□□□ 0.39
CCDC38-203ENST00000546803 RHBDF2Q6PJF5 856 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 DENND1CQ8IV53 801 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 SUGP1Q8IWZ8 645 aaKnown RBP17.51■□□□□ 0.39
CCDC38-203ENST00000546803 MCOLN2Q8IZK6 566 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 C3orf20Q8ND61 904 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 SLC39A13Q96H72 371 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 LTB4R2Q9NPC1 389 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 SPHK2Q9NRA0 654 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 AGO1Q9UL18 857 aaKnown RBP17.51■□□□□ 0.39
CCDC38-203ENST00000546803 MYH10P35580 1976 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 DENND4CQ5VZ89 1909 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 ANAPC1Q9H1A4 1944 aa17.51■□□□□ 0.39
CCDC38-203ENST00000546803 FAM170AA1A519 330 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 SHISA7A6NL88 538 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 AKR1B15C9JRZ8 316 aaPredicted RBP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 NCAM2O15394 837 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms