RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ENDOD1O94919 500 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ZWINTO95229 277 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 LMNAP02545 664 aaKnown RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 LINGO3P0C6S8 592 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 CYP2F1P24903 491 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 MGAT1P26572 445 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ADORA2AP29274 412 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 CCL15Q16663 113 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 LRRC23Q53EV4 343 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 CLNKQ7Z7G1 428 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 CMC1Q7Z7K0 106 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 EXOC8Q8IYI6 725 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ARHGAP24Q8N264 748 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 SNX31Q8N9S9 440 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 SRPK1Q96SB4 655 aaKnown RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 IL1RL2Q9HB29 575 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 NMRK1Q9NWW6 199 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 DDIT4Q9NX09 232 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 LGALS13Q9UHV8 139 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ACTL7BQ9Y614 415 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 TP73O15350 636 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 HBP1O60381 514 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 POMCP01189 267 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 GOT1P17174 413 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 STX3Q13277 289 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 PDCD2Q16342 344 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 TCHHL1Q5QJ38 904 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 PMF1Q6P1K2 205 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ZNF677Q86XU0 584 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 KATNAL2Q8IYT4 538 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 BEST2Q8NFU1 509 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 E2F7Q96AV8 911 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 NSL1Q96IY1 281 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 GMLQ99445 158 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 RSAD1Q9HA92 442 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 FAM8A1Q9UBU6 413 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 TLK1Q9UKI8 766 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 AP4E1Q9UPM8 1137 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 PRG3Q9Y2Y8 225 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 C2CD2Q9Y426 696 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 TCRBV9S1A1TA0A576 114 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ACKR2O00590 384 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 NDC80O14777 642 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 TSPAN8P19075 237 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SERPINB5P36952 375 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 BTKQ06187 659 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ASPHQ12797 758 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SURF1Q15526 300 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 CCDC14Q49A88 953 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 FASTKD1Q53R41 847 aaKnown RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 PPM1JQ5JR12 505 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 VWA5B1Q5TIE3 1220 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 C16orf87Q6PH81 154 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 CPT1BQ92523 772 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 PPWD1Q96BP3 646 aaKnown RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 TEPSINQ96N21 525 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SYT15Q9BQS2 421 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 CAB39LQ9H9S4 337 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ARL8BQ9NVJ2 186 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 V9GYQ6 96 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 RREB1Q92766 1687 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ENO3P13929 434 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 TPP2P29144 1249 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SERPINB4P48594 390 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 CCNA1P78396 465 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 DEUP1Q05D60 604 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 CCDC15Q0P6D6 951 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 MAP7D1Q3KQU3 841 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 MMEL1Q495T6 779 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 HSP90AA5PQ58FG0 334 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 WASHC2DQ5SRD0 308 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ZNF618Q5T7W0 954 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SDHAF4Q5VUM1 108 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 LRRC43Q8N309 656 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 ALLCQ8N6M5 410 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 CHST13Q8NET6 341 aa10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SLC7A6OSQ96CW6 309 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 SNRNP25Q9BV90 132 aaKnown RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 APOBEC2Q9Y235 224 aaKnown RBP10.12□□□□□ -0.79
TRAF1-203ENST00000546084 DDX60LQ5H9U9 1706 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 B3GAT3O94766 335 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 JCHAINP01591 159 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 LMO2P25791 158 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 NDUFV1P49821 464 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 GRIK3Q13003 919 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 ITGA9Q13797 1035 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 UBAP2LQ14157 1087 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 MORF4L2Q15014 288 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SLC45A4Q5BKX6 768 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 C9orf131Q5VYM1 1079 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 IGDCC3Q8IVU1 814 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 WDR75Q8IWA0 830 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 DEFB106AQ8N104 65 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms