RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TRNP1Q6NT89 227 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TAC4Q86UU9 113 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 RXFP2Q8WXD0 754 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 NT5C3BQ969T7 300 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 E2F7Q96AV8 911 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 PGAP3Q96FM1 320 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 CALR3Q96L12 384 aaKnown RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 SLC22A12Q96S37 553 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 NCAPGQ9BPX3 1015 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 CNPY3Q9BT09 278 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TSGA10Q9BZW7 698 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TRPV4Q9HBA0 871 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 ANAPC7Q9UJX3 599 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 NUDT5Q9UKK9 219 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 CPQQ9Y646 472 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 KIAA1549LQ6ZVL6 1849 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 SLC12A8A0AV02 714 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 M0QYT0 321 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 MYO1FO00160 1098 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 MDM4O15151 490 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 TBX18O95935 607 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 F9P00740 461 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 COL4A2P08572 1712 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 LAMP2P13473 410 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 PSMA2P25787 234 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 RING1Q06587 406 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 ACAP1Q15027 740 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 OTUD1Q5VV17 481 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 MTSS1LQ765P7 747 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 SND1Q7KZF4 910 aaKnown RBP eCLIP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 STRADAQ7RTN6 431 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 BNIPLQ7Z465 357 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 CELF5Q8N6W0 485 aaKnown RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 NIPA2Q8N8Q9 360 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 SLC35G2Q8TBE7 412 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 USP13Q92995 863 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 PLD4Q96BZ4 506 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 ZSWIM3Q96MP5 696 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 CFAP57Q96MR6 1250 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 TBCBQ99426 244 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 KLF16Q9BXK1 252 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 RNF38Q9H0F5 515 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 TDP1Q9NUW8 608 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 DDIT4Q9NX09 232 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 OBP2AQ9NY56 170 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 PRKAG3Q9UGI9 489 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 IP6K2Q9UHH9 426 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 SFMBT1Q9UHJ3 866 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 LSM7Q9UK45 103 aaKnown RBP11.22□□□□□ -0.61
PAAF1-216ENST00000546039 TLR6Q9Y2C9 796 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 PPP2R2CQ9Y2T4 447 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 PAXBP1Q9Y5B6 917 aa11.22□□□□□ -0.61
PAAF1-216ENST00000546039 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 CCP110O43303 1012 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ZSCAN12O43309 604 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 MSI1O43347 362 aaKnown RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 KRT86O43790 486 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 PRAMEF12O95522 483 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 IGLV3-27P01718 113 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 SLC2A3P11169 496 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 IL9P15248 144 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 RDXP35241 583 aaKnown RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ARHGAP25P42331 645 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 NOP2P46087 812 aaKnown RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 TBX4P57082 545 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 PITX1P78337 314 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ATP11AP98196 1134 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 OGDHQ02218 1023 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 DEUP1Q05D60 604 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ZNF252P-AS1Q0IIN9 211 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 MTA1Q13330 715 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 PIGHQ14442 188 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 CDO1Q16878 200 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 C15orf59Q2T9L4 293 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 CCDC14Q49A88 953 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 FAM78AQ5JUQ0 283 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 NUGGCQ68CJ6 796 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 POTEHQ6S545 545 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ARID3BQ8IVW6 561 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ZDHHC14Q8IZN3 488 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ADAM32Q8TC27 787 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 SH3RF2Q8TEC5 729 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 FAM172AQ8WUF8 416 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 ATXN2LQ8WWM7 1075 aaKnown RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 CENPIQ92674 756 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-216ENST00000546039 TRIM7Q9C029 511 aa11.21□□□□□ -0.61
PAAF1-216ENST00000546039 DCLK3Q9C098 648 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms