RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZNF417Q8TAU3 575 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SPATA20Q8TB22 786 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 BPIFB1Q8TDL5 484 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 CSGALNACT1Q8TDX6 532 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 BTBD6Q96KE9 485 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 TNIP3Q96KP6 325 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 C8orf48Q96LL4 319 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF587Q96SQ5 575 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 TTLL2Q9BWV7 592 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SLC46A2Q9BY10 475 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 GTPBP4Q9BZE4 634 aaKnown RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 IMPG2Q9BZV3 1241 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ADAM19Q9H013 955 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SMYD3Q9H7B4 428 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 HOOK1Q9UJC3 728 aaKnown RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 NAGPAQ9UK23 515 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 MAGED2Q9UNF1 606 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 TRIM33Q9UPN9 1127 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 MAPK8IP1Q9UQF2 711 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 PLXND1Q9Y4D7 1925 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 PIAS3Q9Y6X2 628 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 CEP192Q8TEP8 1941 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 TRAV19A0A0A6YYK7 116 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 FAM170BA6NMN3 283 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 LRRN2O75325 713 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 SMC2O95347 1197 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 PDGFRBP09619 1106 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 PTPN1P18031 435 aaKnown RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 CD72P21854 359 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 GTF2H1P32780 548 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 PSMC2P35998 433 aaKnown RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 GRIK1P39086 918 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ASPAP45381 313 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 PPP3CCP48454 512 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 FANCCQ00597 558 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 PCDH1Q08174 1060 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ADAM9Q13443 819 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF528Q3MIS6 628 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 C1orf220Q5T0J3 134 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 MEI1Q5TIA1 1274 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF658Q5TYW1 1059 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 TXNDC8Q6A555 127 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ZC3H14Q6PJT7 736 aaKnown RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 SCARA5Q6ZMJ2 495 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 RALGPS2Q86X27 583 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ELOA2Q8IYF1 753 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 SMYD4Q8IYR2 804 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 MAB21L3Q8N8X9 362 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 FAM3CQ92520 227 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 USP13Q92995 863 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 SMARCD1Q96GM5 515 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 LRRC3BQ96PB8 259 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF518BQ9C0D4 1074 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 DPEP3Q9H4B8 488 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 C8orf33Q9H7E9 229 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 TDP1Q9NUW8 608 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 THG1LQ9NWX6 298 aaKnown RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 FBXO4Q9UKT5 387 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 MTF2Q9Y483 593 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-223ENST00000545440 DMDP11532 3685 aa8.15□□□□□ -1.1
SNHG1-223ENST00000545440 NUP205Q92621 2012 aa8.15□□□□□ -1.11
SNHG1-223ENST00000545440 GVINP1Q7Z2Y8 2422 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PTPRZ1P23471 2315 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PRR23AA6NEV1 266 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 METTL12A8MUP2 240 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 F8VP50 259 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SPECC1L-ADORA2AF8WAN1 911 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 H3BRJ5 948 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 CETN3O15182 167 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SLC16A3O15427 465 aaKnown RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 KINO60870 393 aaKnown RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 HLA-DRAP01903 254 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 CKMP06732 381 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TRIM49P0CI25 452 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TRIM49CP0CI26 452 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 EPB41P11171 864 aaKnown RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TRIM21P19474 475 aaKnown RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PPP1R2P41236 205 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PRCPP42785 496 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 KPNA1P52294 538 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 LRRC63Q05C16 580 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PPP3CAQ08209 521 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 INCA1Q0VD86 236 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 FZD5Q13467 585 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 ZNF77Q15935 545 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 HP1BP3Q5SSJ5 553 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 KRT39Q6A163 491 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 FRMD5Q7Z6J6 570 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 UNC93AQ86WB7 457 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 ZC3H3Q8IXZ2 948 aaKnown RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 CCDC150Q8NCX0 1101 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TAS1R2Q8TE23 839 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 NKD2Q969F2 451 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SMARCE1Q969G3 411 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 FAXDC2Q96IV6 333 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 ZFYVE19Q96K21 471 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SLITRK1Q96PX8 696 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms