RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 CPQQ9Y646 472 aa13.56□□□□□ -0.24
CDCA3-210ENST00000545368 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDCA3-210ENST00000545368 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 SLC12A8A0AV02 714 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 M0QYT0 321 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 IRAK2O43187 625 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 RNF8O76064 485 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 MTA2O94776 668 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 WEE1P30291 646 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 RDXP35241 583 aaKnown RBP13.55□□□□□ -0.24
CDCA3-210ENST00000545368 COG7P83436 770 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 ATP11AP98196 1134 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 NME3Q13232 169 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 NNTQ13423 1086 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 PIGHQ14442 188 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-210ENST00000545368 TCEAL1Q15170 157 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 SMAD2Q15796 467 aaKnown RBP13.55□□□□□ -0.24
CDCA3-210ENST00000545368 IFI16Q16666 785 aaKnown RBP13.55□□□□□ -0.24
CDCA3-210ENST00000545368 CDO1Q16878 200 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 CCDC14Q49A88 953 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 TRNP1Q6NT89 227 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 SLC22A12Q96S37 553 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 MYADMQ96S97 322 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 RNF38Q9H0F5 515 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 PRDM6Q9NQX0 595 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 TDP1Q9NUW8 608 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 SMPD4Q9NXE4 827 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 ARHGAP26Q9UNA1 814 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 TFR2Q9UP52 801 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 USTQ9Y2C2 406 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 PPP2R2CQ9Y2T4 447 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 HBS1LQ9Y450 684 aaKnown RBP13.55□□□□□ -0.24
CDCA3-210ENST00000545368 PAXBP1Q9Y5B6 917 aa13.55□□□□□ -0.24
CDCA3-210ENST00000545368 DOCK8Q8NF50 2099 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 CCP110O43303 1012 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 MSI1O43347 362 aaKnown RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 IGLV3-25P01717 112 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 LAMP2P13473 410 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 SP100P23497 879 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 HADHBP55084 474 aaKnown RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TBX4P57082 545 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TFF2Q03403 129 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 ACAP1Q15027 740 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TRIP4Q15650 581 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 C15orf59Q2T9L4 293 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 HS1BP3Q53T59 392 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 MTSS1LQ765P7 747 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 CELF5Q8N6W0 485 aaKnown RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TTC16Q8NEE8 873 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 FAM172AQ8WUF8 416 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 SMARCD2Q92925 531 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 RNF34Q969K3 372 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 NT5C3BQ969T7 300 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 E2F7Q96AV8 911 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 PLD4Q96BZ4 506 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 PGAP3Q96FM1 320 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 ZSWIM3Q96MP5 696 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 ASB16Q96NS5 453 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TBCBQ99426 244 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 NCAPGQ9BPX3 1015 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 KLF16Q9BXK1 252 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 LACRTQ9GZZ8 138 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 EPS15L1Q9UBC2 864 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
CDCA3-210ENST00000545368 TLR6Q9Y2C9 796 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 SH3BP1Q9Y3L3 701 aa13.54□□□□□ -0.24
CDCA3-210ENST00000545368 REV3LO60673 3130 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 MACROD2A1Z1Q3 448 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 BUB1O43683 1085 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 APOEP02649 317 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 HMBSP08397 361 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 IRF1P10914 325 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 SLC2A3P11169 496 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 TCF3P15923 654 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 CCR1P32246 355 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 PITX1P78337 314 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-210ENST00000545368 OGDHQ02218 1023 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 RING1Q06587 406 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 MESDQ14696 234 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 FAM78AQ5JUQ0 283 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 BRMS1LQ5PSV4 323 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 NUGGCQ68CJ6 796 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 ZNF662Q6ZS27 426 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 NIPA2Q8N8Q9 360 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 SH3RF2Q8TEC5 729 aa13.53□□□□□ -0.24
CDCA3-210ENST00000545368 USP13Q92995 863 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-210ENST00000545368 BTBD6Q96KE9 485 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms