RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 MIPP30301 263 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 GRIK1P39086 918 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 MATKP42679 507 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 ARSEP51690 589 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 RWDD2BP57060 319 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 RNASE9P60153 205 aaKnown RBP7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 YWHAZP63104 245 aaKnown RBP7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 UBE3AQ05086 875 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TAZQ16635 292 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 LRRC38Q5VT99 294 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 KIAA1841Q6NSI8 718 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 DCUN1D2Q6PH85 259 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 SYDE1Q6ZW31 735 aaPredicted RBP7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 BEND5Q7L4P6 421 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TMEM150AQ86TG1 271 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 SCN4BQ8IWT1 228 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 DEFB106AQ8N104 65 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 SIX6OS1Q8N1H7 587 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 IRGQQ8WZA9 623 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TBCBQ99426 244 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 SEPT5Q99719 369 aaPredicted RBP7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TCF25Q9BQ70 676 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 LRRC3Q9BY71 257 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 MAGEB5Q9BZ81 275 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 NKX2-4Q9H2Z4 354 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 WDR6Q9NNW5 1121 aaKnown RBP7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 NAALADL1Q9UQQ1 740 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 NOTCH4Q99466 2003 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 OBSL1O75147 1896 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 MYO9BQ13459 2157 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TCRBV7S2A1N4TA0A589 114 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 H3BNC9 293 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PHF2O75151 1096 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 LTFP02788 710 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PYGMP11217 842 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PCK1P35558 622 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CETN2P41208 172 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 FNTAP49354 379 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC8A3P57103 927 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 DR1Q01658 176 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 KRT17Q04695 432 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ADCY2Q08462 1091 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PIGHQ14442 188 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SIX1Q15475 284 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CYP1B1Q16678 543 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC25A52Q3SY17 297 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 MGAT5BQ3V5L5 792 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 EFHC1Q5JVL4 640 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 BSPRYQ5W0U4 402 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 GSPT2Q8IYD1 628 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 NUP93Q8N1F7 819 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC22A17Q8WUG5 538 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 EDEM1Q92611 657 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PGAP3Q96FM1 320 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 MYRFLQ96LU7 910 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 GDAP1L1Q96MZ0 367 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ZIM3Q96PE6 472 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ERP44Q9BS26 406 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 AP1M1Q9BXS5 423 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CAPS2Q9BXY5 557 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 DDX47Q9H0S4 455 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 IL21Q9HBE4 155 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 POPDC2Q9HBU9 364 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 TLR9Q9NR96 1032 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PIGVQ9NUD9 493 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 MTMR10Q9NXD2 777 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 GMIPQ9P107 970 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 STK39Q9UEW8 545 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 MTRF1LQ9UGC7 380 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 AMACRQ9UHK6 382 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 RWDD3Q9Y3V2 267 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 INSL5Q9Y5Q6 135 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ANAPC1Q9H1A4 1944 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 A0A1W2PQH9 124 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ERICH4A6NGS2 130 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PSTPIP1O43586 416 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SPOPO43791 374 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PAPLNO95428 1278 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CXCL14O95715 111 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SPATA31D3P0C874 917 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 MYZAPP0CAP1 466 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CLCN4P51793 760 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 HNRNPH2P55795 449 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ATP11AP98196 1134 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ZNF211Q13398 564 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 KCNC3Q14003 757 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CA9Q16790 459 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 AGBL2Q5U5Z8 902 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PLPP4Q5VZY2 271 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 MSANTD2Q6P1R3 559 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CEP128Q6ZU80 1094 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SPATA31D4Q6ZUB0 917 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms