RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 AMACRQ9UHK6 382 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 FBXW11Q9UKB1 542 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 IRAK3Q9Y616 596 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP31.64■■■□□ 2.66
CCM2-219ENST00000544363 PRRG1O14668 218 aa31.64■■■□□ 2.66
CCM2-219ENST00000544363 CXCR3P49682 368 aa31.64■■■□□ 2.66
CCM2-219ENST00000544363 ERVFC1P60507 584 aa31.64■■■□□ 2.66
CCM2-219ENST00000544363 MMRN1Q13201 1228 aa31.64■■■□□ 2.66
CCM2-219ENST00000544363 C1orf54Q8WWF1 131 aa31.64■■■□□ 2.66
CCM2-219ENST00000544363 PNKPQ96T60 521 aa31.64■■■□□ 2.66
CCM2-219ENST00000544363 R3HDM2Q9Y2K5 976 aaKnown RBP31.64■■■□□ 2.66
CCM2-219ENST00000544363 ZNF487B1APH4 448 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 ARHGEF15O94989 841 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 SLC7A5Q01650 507 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 UBE3AQ05086 875 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 EIF4EBP2Q13542 120 aaPredicted RBP31.64■■■□□ 2.65
CCM2-219ENST00000544363 BBS12Q6ZW61 710 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 MAATS1Q7Z4T9 603 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 RFX6Q8HWS3 928 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 DCLK3Q9C098 648 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 ENTPD7Q9NQZ7 604 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 MTMR10Q9NXD2 777 aa31.64■■■□□ 2.65
CCM2-219ENST00000544363 DMGDHQ9UI17 866 aaKnown RBP31.64■■■□□ 2.65
CCM2-219ENST00000544363 MAGED2Q9UNF1 606 aaPredicted RBP31.64■■■□□ 2.65
CCM2-219ENST00000544363 RB1P06400 928 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 CSH1P0DML2 217 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 CSH2P0DML3 217 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 IL4RP24394 825 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 ADRA1BP35368 520 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 COILP38432 576 aaPredicted RBP31.63■■■□□ 2.65
CCM2-219ENST00000544363 FNTAP49354 379 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 MSANTD2Q6P1R3 559 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 POF1BQ8WVV4 589 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 CASP10Q92851 521 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 RUNDC3BQ96NL0 473 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 KLHL5Q96PQ7 755 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 KCTD15Q96SI1 283 aaPredicted RBP31.63■■■□□ 2.65
CCM2-219ENST00000544363 ZNF670Q9BS34 389 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 MAK16Q9BXY0 300 aaKnown RBP31.63■■■□□ 2.65
CCM2-219ENST00000544363 PCYOX1Q9UHG3 505 aa31.63■■■□□ 2.65
CCM2-219ENST00000544363 IRAK2O43187 625 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 CST8O60676 142 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 TUBBP07437 444 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 ZDHHC11BP0C7U3 371 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 SCAPQ12770 1279 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 CCNG2Q16589 344 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 PPP6R3Q5H9R7 873 aaPredicted RBP31.62■■■□□ 2.65
CCM2-219ENST00000544363 TTC27Q6P3X3 843 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 CCDC137Q6PK04 289 aaKnown RBP31.62■■■□□ 2.65
CCM2-219ENST00000544363 RNF157Q96PX1 679 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 MAGEB5Q9BZ81 275 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 WDCPQ9H6R7 721 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 STIM2Q9P246 746 aa31.62■■■□□ 2.65
CCM2-219ENST00000544363 ADH1AP07327 375 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 RARGP13631 454 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 DNAJB1P25685 340 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 DHX34Q14147 1143 aaKnown RBP31.61■■■□□ 2.65
CCM2-219ENST00000544363 ARL13BQ3SXY8 428 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 EFHC2Q5JST6 749 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 SPRED2Q7Z698 418 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 ATG4AQ8WYN0 398 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 ANKRD7Q92527 254 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 RUBCNQ92622 972 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 FAF2Q96CS3 445 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 EMILIN2Q9BXX0 1053 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 UBE2OQ9C0C9 1292 aaKnown RBP31.61■■■□□ 2.65
CCM2-219ENST00000544363 TLR9Q9NR96 1032 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 TMPRSS4Q9NRS4 437 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP31.61■■■□□ 2.65
CCM2-219ENST00000544363 TMEM51Q9NW97 253 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 SFMBT1Q9UHJ3 866 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 NUDT5Q9UKK9 219 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 RAB21Q9UL25 225 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 INSL5Q9Y5Q6 135 aa31.61■■■□□ 2.65
CCM2-219ENST00000544363 TGM5O43548 720 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 CA3P07451 260 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 HMGA1P17096 107 aaKnown RBP31.6■■■□□ 2.65
CCM2-219ENST00000544363 TFDP2Q14188 446 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 VEPH1Q14D04 833 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 ANKRD20A8PQ5CZ79 823 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 WDR93Q6P2C0 686 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 MRPL43Q8N983 215 aaKnown RBP31.6■■■□□ 2.65
CCM2-219ENST00000544363 OVCA2Q8WZ82 227 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 OLA1Q9NTK5 396 aaKnown RBP31.6■■■□□ 2.65
CCM2-219ENST00000544363 PCDHA11Q9Y5I1 949 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 HEXIM1O94992 359 aaKnown RBP31.6■■■□□ 2.65
CCM2-219ENST00000544363 DYNLT1P63172 113 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 DR1Q01658 176 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 TWF1Q12792 350 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 LILRA6Q6PI73 481 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 PYROXD2Q8N2H3 581 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 PDZD8Q8NEN9 1154 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 MYRFLQ96LU7 910 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 SERPINB11Q96P15 392 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 ANLNQ9NQW6 1124 aa31.6■■■□□ 2.65
CCM2-219ENST00000544363 C2orf71A6NGG8 1288 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 TTI1O43156 1089 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 SNX1Q13596 522 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 PLPP4Q5VZY2 271 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 CCDC105Q8IYK2 499 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms