RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EMC1Q8N766 993 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 JOSD2Q8TAC2 188 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 ADAM32Q8TC27 787 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 DEPDC1BQ8WUY9 529 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 ANP32BQ92688 251 aaKnown RBP14.22□□□□□ -0.13
SP140-213ENST00000543928 WBP2Q969T9 261 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 BAG1Q99933 345 aaPredicted RBP14.22□□□□□ -0.13
SP140-213ENST00000543928 TRMT61BQ9BVS5 477 aaKnown RBP14.22□□□□□ -0.13
SP140-213ENST00000543928 CNOT8Q9UFF9 292 aaKnown RBP14.22□□□□□ -0.13
SP140-213ENST00000543928 SH3BP1Q9Y3L3 701 aa14.22□□□□□ -0.13
SP140-213ENST00000543928 SOWAHDA6NJG2 315 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 SIGLEC16A6NMB1 481 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 SCAMP3O14828 347 aaKnown RBP14.21□□□□□ -0.13
SP140-213ENST00000543928 STC2O76061 302 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 TRUB2O95900 331 aaKnown RBP14.21□□□□□ -0.13
SP140-213ENST00000543928 GDI1P31150 447 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 GALCP54803 685 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 MAMLD1Q13495 774 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 PLEKHA7Q6IQ23 1121 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 TRNP1Q6NT89 227 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 CC2D1AQ6P1N0 951 aaPredicted RBP14.21□□□□□ -0.13
SP140-213ENST00000543928 ARCQ7LC44 396 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 SERPINB11Q96P15 392 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 MCEEQ96PE7 176 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 THAP2Q9H0W7 228 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 FAM204AQ9H8W3 233 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 PARVAQ9NVD7 372 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 THG1LQ9NWX6 298 aaKnown RBP14.21□□□□□ -0.13
SP140-213ENST00000543928 MYO1AQ9UBC5 1043 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 STAP1Q9ULZ2 295 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 SORCS3Q9UPU3 1222 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 HBS1LQ9Y450 684 aaKnown RBP14.21□□□□□ -0.13
SP140-213ENST00000543928 TTC28Q96AY4 2481 aa14.21□□□□□ -0.13
SP140-213ENST00000543928 E2F8A0AVK6 867 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 ANKRD62A6NC57 917 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 ZNF263O14978 683 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 IRAK2O43187 625 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 NARSO43776 548 aaKnown RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 IGLV3-25P01717 112 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 RFC1P35251 1148 aaPredicted RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 CYLC1P35663 651 aaPredicted RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 SULT1E1P49888 294 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 KPNA1P52294 538 aaPredicted RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 TBX4P57082 545 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 TRIP4Q15650 581 aaPredicted RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 ARHGAP29Q52LW3 1261 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 PPP1R15BQ5SWA1 713 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 DCUN1D2Q6PH85 259 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 TMEM139Q8IV31 216 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 CCDC170Q8IYT3 715 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 RXFP2Q8WXD0 754 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 PLD4Q96BZ4 506 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 ZFYVE19Q96K21 471 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 CFAP57Q96MR6 1250 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 NPY6RQ99463 290 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 DDX23Q9BUQ8 820 aaKnown RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 PACSIN1Q9BY11 444 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 BRD9Q9H8M2 597 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 DDIT4Q9NX09 232 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 RRN3Q9NYV6 651 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 MUTYHQ9UIF7 546 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 LSM7Q9UK45 103 aaKnown RBP14.2□□□□□ -0.14
SP140-213ENST00000543928 WNT6Q9Y6F9 365 aa14.2□□□□□ -0.14
SP140-213ENST00000543928 VCANP13611 3396 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 C2CD4BA6NLJ0 364 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 M0QYT0 321 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 CHADO15335 359 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 GREM1O60565 184 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 LCA5LO95447 670 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 H2AFZP0C0S5 128 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 PDGFRAP16234 1089 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 TFE3P19532 575 aaPredicted RBP14.19□□□□□ -0.14
SP140-213ENST00000543928 GPD1P21695 349 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 SDC4P31431 198 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 GBP1P32455 592 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 GPC5P78333 572 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 NME3Q13232 169 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 NNTQ13423 1086 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 SLC25A52Q3SY17 297 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 OTUD1Q5VV17 481 aaPredicted RBP14.19□□□□□ -0.14
SP140-213ENST00000543928 RAD9BQ6WBX8 426 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 HTR3DQ70Z44 454 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 H2AFVQ71UI9 128 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 BBS7Q8IWZ6 715 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 KIAA1958Q8N8K9 716 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 OSCP1Q8WVF1 389 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 NT5C3BQ969T7 300 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 ARHGEF26Q96DR7 871 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 ASIC4Q96FT7 647 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 FCRL2Q96LA5 508 aaPredicted RBP14.19□□□□□ -0.14
SP140-213ENST00000543928 TBCBQ99426 244 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 FAM83CQ9BQN1 747 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 MRPL47Q9HD33 250 aaKnown RBP14.19□□□□□ -0.14
SP140-213ENST00000543928 DUS2Q9NX74 493 aaKnown RBP14.19□□□□□ -0.14
SP140-213ENST00000543928 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 DUSP12Q9UNI6 340 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms