RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 KLF16Q9BXK1 252 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 DCLK3Q9C098 648 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 TRPV4Q9HBA0 871 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MRPL47Q9HD33 250 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 SPTLC3Q9NUV7 552 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 PARVAQ9NVD7 372 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 DDIT4Q9NX09 232 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 RRN3Q9NYV6 651 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 TBC1D14Q9P2M4 693 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 CNOT8Q9UFF9 292 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 SLC12A6Q9UHW9 1150 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MUTYHQ9UIF7 546 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 WNT6Q9Y6F9 365 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SCINQ9Y6U3 715 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 DOCK8Q8NF50 2099 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 E2F8A0AVK6 867 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CHADO15335 359 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 NARSO43776 548 aaKnown RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 GJB6O95452 261 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 NFATC1O95644 943 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 OLFM2O95897 454 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 TRUB2O95900 331 aaKnown RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 CYBBP04839 570 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 H2AFZP0C0S5 128 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 SRFP11831 508 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ALADP13716 330 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 GPD1P21695 349 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 RRM1P23921 792 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CORO1AP31146 461 aaKnown RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 SCNN1AP37088 669 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 MATKP42679 507 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 SLC11A2P49281 568 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 GPC5P78333 572 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ATP11AP98196 1134 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 USP4Q13107 963 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 MAPK8IP2Q13387 824 aaPredicted RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 ARID5BQ14865 1188 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 PDGFRLQ15198 375 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 ZNF77Q15935 545 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 SLC18A3Q16572 532 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ANO4Q32M45 955 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 NUGGCQ68CJ6 796 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 TRIM68Q6AZZ1 485 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 MSANTD2Q6P1R3 559 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 POTEHQ6S545 545 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 H2AFVQ71UI9 128 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 BEND5Q7L4P6 421 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 TAC4Q86UU9 113 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 TMTC1Q8IUR5 882 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 DENND1CQ8IV53 801 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 UNC45BQ8IWX7 931 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 UBALD2Q8IYN6 164 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CCDC170Q8IYT3 715 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CPA6Q8N4T0 437 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ZNF276Q8N554 614 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 EMC1Q8N766 993 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ATP6V0D2Q8N8Y2 350 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 C3orf20Q8ND61 904 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 JOSD2Q8TAC2 188 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 OSCP1Q8WVF1 389 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 RXFP2Q8WXD0 754 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ATP2A3Q93084 1043 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 RSPRY1Q96DX4 576 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CFAP57Q96MR6 1250 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 SLC2A13Q96QE2 648 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 BAG1Q99933 345 aaPredicted RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 SYT11Q9BT88 431 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ISCUQ9H1K1 167 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 MFSD1Q9H3U5 465 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 SMOC2Q9H3U7 446 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 EBF3Q9H4W6 596 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CD320Q9NPF0 282 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CTTNBP2NLQ9P2B4 639 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 CA14Q9ULX7 337 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 DUSP12Q9UNI6 340 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 ZNF510Q9Y2H8 683 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 HBS1LQ9Y450 684 aaKnown RBP6.58□□□□□ -1.36
LTBR-212ENST00000543542 PAXBP1Q9Y5B6 917 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 TICRRQ7Z2Z1 1910 aa6.58□□□□□ -1.36
LTBR-212ENST00000543542 SPTBN5Q9NRC6 3674 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 TYW5A2RUC4 315 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 SOWAHDA6NJG2 315 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 SIGLEC16A6NMB1 481 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 TNFRSF10AO00220 468 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 DCXO43602 365 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 STC2O76061 302 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 RNF8O76064 485 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 ADH1CP00326 375 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 F9P00740 461 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 FYNP06241 537 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 SLC2A3P11169 496 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 ARSAP15289 507 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 TCF3P15923 654 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 PSMA2P25787 234 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 CCR1P32246 355 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 RFC1P35251 1148 aaPredicted RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 CHKAP35790 457 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms