RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MAP1SQ66K74 1059 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC9A4Q6AI14 798 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 JADE1Q6IE81 842 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF449Q6P9G9 518 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 DARS2Q6PI48 645 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NPNTQ6UXI9 565 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 C4orf50Q6ZRC1 276 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PRPF39Q86UA1 669 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CAND1Q86VP6 1230 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC26A11Q86WA9 606 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 LRRC6Q86X45 466 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TTC39CQ8N584 583 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PQLC3Q8N755 202 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 MCUQ8NE86 351 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ANKK1Q8NFD2 765 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TRPM4Q8TD43 1214 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 AFG1LQ8WV93 481 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 RXFP2Q8WXD0 754 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HSPH1Q92598 858 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 LRRC39Q96DD0 335 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NAF1Q96HR8 494 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 KLF6Q99612 283 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ADPGKQ9BRR6 497 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 BTBD10Q9BSF8 475 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CALN1Q9BXU9 219 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CADM1Q9BY67 442 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 MMADHCQ9H3L0 296 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ASB7Q9H672 318 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SYNCQ9H7C4 482 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 IFT122Q9HBG6 1241 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ARL8BQ9NVJ2 186 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PRMT7Q9NVM4 692 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SIRPGQ9P1W8 387 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PAK5Q9P286 719 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HEY2Q9UBP5 337 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TSR3Q9UJK0 312 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SUFUQ9UMX1 484 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PCNTO95613 3336 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 WDR91A4D1P6 747 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 A6NHS1 94 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 M0QYV0 167 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 MDM4O15151 490 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HBP1O60381 514 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 RFPL1O75677 317 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SMNDC1O75940 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HAUS5O94927 633 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 LUC7L3O95232 432 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 C22orf31O95567 290 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 GJB1P08034 283 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 INHBAP08476 426 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 KRT19P08727 400 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SNRPAP09012 282 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 P4HA1P13674 534 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PDGFRAP16234 1089 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SERPINB3P29508 390 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 OSTNP61366 133 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 OVGP1Q12889 678 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ORC1Q13415 861 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 VGLL4Q14135 290 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NAA25Q14CX7 972 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 STILQ15468 1287 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 KYAT1Q16773 422 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC10A6Q3KNW5 377 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CCDC14Q49A88 953 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HSF5Q4G112 596 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 RAB6CQ53S08 254 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 BOLA3Q53S33 107 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 FAM102AQ5T9C2 384 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 EFCAB12Q6NXP0 572 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 OLFML1Q6UWY5 402 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 C4orf22Q6V702 233 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CDHR3Q6ZTQ4 885 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 FAM183BPQ6ZVS7 135 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CYS1Q717R9 158 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CDR2LQ86X02 465 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NT5DC4Q86YG4 428 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TMEM130Q8N3G9 435 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TAB3Q8N5C8 712 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TEX9Q8N6V9 391 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PCDH19Q8TAB3 1148 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TTC8Q8TAM2 541 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 RAB3IL1Q8TBN0 382 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TRAPPC12Q8WVT3 735 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HPDLQ96IR7 371 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NSL1Q96IY1 281 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PIWIL1Q96J94 861 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HEXIM2Q96MH2 286 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NLRP4Q96MN2 994 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 C7orf26Q96N11 449 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 FAM111AQ96PZ2 611 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NUDCD1Q96RS6 583 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SRPK1Q96SB4 655 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TBCBQ99426 244 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TMEM120AQ9BXJ8 343 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 INO80BQ9C086 356 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 MIS12Q9H081 205 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms