RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 XPO6Q96QU8 1125 aaKnown RBP20.87■□□□□ 0.93
DDX11-220ENST00000542244 GABRG3Q99928 467 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 ULBP1Q9BZM6 244 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 TMEM9BQ9NQ34 198 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 WDR35Q9P2L0 1181 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 PILRBQ9UKJ0 227 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 AGO1Q9UL18 857 aaKnown RBP20.87■□□□□ 0.93
DDX11-220ENST00000542244 CYP8B1Q9UNU6 501 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 PLXND1Q9Y4D7 1925 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 CACNA1BQ00975 2339 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 CETN3O15182 167 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 PENKP01210 267 aaPredicted RBP20.86■□□□□ 0.93
DDX11-220ENST00000542244 CD44P16070 742 aaKnown RBP20.86■□□□□ 0.93
DDX11-220ENST00000542244 CORO1AP31146 461 aaKnown RBP20.86■□□□□ 0.93
DDX11-220ENST00000542244 RPL6Q02878 288 aaKnown RBP20.86■□□□□ 0.93
DDX11-220ENST00000542244 PDE4CQ08493 712 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 TCERG1LQ5VWI1 586 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 UBR7Q8N806 425 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 UBA3Q8TBC4 463 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 KCNV2Q8TDN2 545 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 CLIC5Q9NZA1 410 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 ANGPTL2Q9UKU9 493 aa20.86■□□□□ 0.93
DDX11-220ENST00000542244 GON4LQ3T8J9 2241 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 EPB41P11171 864 aaKnown RBP20.85■□□□□ 0.93
DDX11-220ENST00000542244 ENGP17813 658 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 TKTL1P51854 596 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 MFAP3P55082 362 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 YWHAGP61981 247 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDX11-220ENST00000542244 ST3GAL2Q16842 350 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 ZNF658Q5TYW1 1059 aaPredicted RBP20.85■□□□□ 0.93
DDX11-220ENST00000542244 LYSMD4Q5XG99 296 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 SYT12Q8IV01 421 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 DENND1CQ8IV53 801 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 ZNF276Q8N554 614 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 ANKRD52Q8NB46 1076 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 CCDC150Q8NCX0 1101 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 DEFB124Q8NES8 71 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 SORCS1Q8WY21 1168 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 ZSWIM1Q9BR11 485 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 EVLQ9UI08 416 aaPredicted RBP20.85■□□□□ 0.93
DDX11-220ENST00000542244 WASF3Q9UPY6 502 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 COQ4Q9Y3A0 265 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 GTF3C3Q9Y5Q9 886 aa20.85■□□□□ 0.93
DDX11-220ENST00000542244 SLC12A8A0AV02 714 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 RALAP11233 206 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 IL12RB1P42701 662 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 GOLGA8FQ08AF8 430 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 GOLGA8DPQ0D2H9 430 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 CUL2Q13617 745 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 PEAR1Q5VY43 1037 aaPredicted RBP20.84■□□□□ 0.93
DDX11-220ENST00000542244 TMEM215Q68D42 235 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 TRMT11Q7Z4G4 463 aaKnown RBP20.84■□□□□ 0.93
DDX11-220ENST00000542244 RBBP8NLQ8NC74 664 aaPredicted RBP20.84■□□□□ 0.93
DDX11-220ENST00000542244 SPATA20Q8TB22 786 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 TFAP2BQ92481 460 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 KAT5Q92993 513 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 SLC35C1Q96A29 364 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 MRGPRX1Q96LB2 322 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 MARCH2Q9P0N8 246 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 TSPAN16Q9UKR8 245 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 STON1Q9Y6Q2 735 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 USP24Q9UPU5 2620 aa20.84■□□□□ 0.93
DDX11-220ENST00000542244 FRYQ5TBA9 3013 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 ZFHX4Q86UP3 3567 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 ADAMTS9Q9P2N4 1935 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 PSEN1P49768 467 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 SHC2P98077 582 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 ZNF252P-AS1Q0IIN9 211 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 PM20D1Q6GTS8 502 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 EDEM1Q92611 657 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 PIWIL1Q96J94 861 aaKnown RBP20.83■□□□□ 0.93
DDX11-220ENST00000542244 UBXN6Q9BZV1 441 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 SFMBT1Q9UHJ3 866 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 ATP6V1DQ9Y5K8 247 aa20.83■□□□□ 0.93
DDX11-220ENST00000542244 YJEFN3A6XGL0 299 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 E7ENQ6 273 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 RNF225M0QZC1 329 aaPredicted RBP20.82■□□□□ 0.92
DDX11-220ENST00000542244 PIK3R2O00459 728 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 TSPAN3O60637 253 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 ZBED1O96006 694 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 CFIP05156 583 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 TRIM21P19474 475 aaKnown RBP20.82■□□□□ 0.92
DDX11-220ENST00000542244 BMP6P22004 513 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 ZNF33AQ06730 810 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 FUT11Q495W5 492 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 PREPLQ4J6C6 727 aaPredicted RBP20.82■□□□□ 0.92
DDX11-220ENST00000542244 COBLL1Q53SF7 1204 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 DAB2IPQ5VWQ8 1189 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 SLC23A3Q6PIS1 610 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 MKRN2Q9H000 416 aaKnown RBP20.82■□□□□ 0.92
DDX11-220ENST00000542244 SLC27A6Q9Y2P4 619 aa20.82■□□□□ 0.92
DDX11-220ENST00000542244 KCNJ18B7U540 433 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 O00370 1275 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 SLC16A3O15427 465 aaKnown RBP20.81■□□□□ 0.92
DDX11-220ENST00000542244 MSI1O43347 362 aaKnown RBP20.81■□□□□ 0.92
DDX11-220ENST00000542244 CD19P15391 556 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 MAOBP27338 520 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 SGSHP51688 502 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 COG7P83436 770 aa20.81■□□□□ 0.92
DDX11-220ENST00000542244 ADIGQ0VDE8 80 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms