RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FAM173BQ6P4H8 233 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 KLHDC10Q6PID8 442 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SYCE2Q6PIF2 218 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DCLRE1AQ6PJP8 1040 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 VHLLQ6RSH7 139 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 C6orf15Q6UXA7 325 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 UNC5DQ6UXZ4 953 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 RAD9BQ6WBX8 426 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 Q6ZS46 218 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 BEND4Q6ZU67 534 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 RAPH1Q70E73 1250 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CATSPER4Q7RTX7 472 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ATG9AQ7Z3C6 839 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 C14orf80Q86SX3 495 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 JAZF1Q86VZ6 243 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CDR2LQ86X02 465 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PALB2Q86YC2 1186 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CAMK1DQ8IU85 385 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TICAM1Q8IUC6 712 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CDH26Q8IXH8 852 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FAM178BQ8IXR5 827 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PALM2Q8IXS6 379 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PHACTR4Q8IZ21 702 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 AHI1Q8N157 1196 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SH2D3CQ8N5H7 860 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 NATD1Q8N6N6 113 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FSIP1Q8NA03 581 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PDPRQ8NCN5 879 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ARRDC4Q8NCT1 418 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SIMC1Q8NDZ2 872 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ST13P5Q8NFI4 369 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SLC22A8Q8TCC7 542 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TRUB1Q8WWH5 349 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SEPT1Q8WYJ6 367 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PRCCQ92733 491 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ISL2Q96A47 359 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ERLEC1Q96DZ1 483 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SCARF2Q96GP6 870 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SLC39A13Q96H72 371 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC74BQ96LY2 380 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SERPINB12Q96P63 405 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ALPK1Q96QP1 1244 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SNX18Q96RF0 628 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 BBS4Q96RK4 519 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ECSITQ9BQ95 431 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 OR2B2Q9GZK3 357 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CLPBQ9H078 707 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 KLC2Q9H0B6 622 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 RBM38Q9H0Z9 239 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ISCUQ9H1K1 167 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 HSD3B7Q9H2F3 369 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ADNPQ9H2P0 1102 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DPEP3Q9H4B8 488 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF696Q9H7X3 374 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 C17orf75Q9HAS0 396 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF287Q9HBT7 754 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 LGR6Q9HBX8 967 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FANCFQ9NPI8 374 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 WASH6PQ9NQA3 447 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 USP40Q9NVE5 1235 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FGFR1OP2Q9NVK5 253 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PIH1D1Q9NWS0 290 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 RRN3Q9NYV6 651 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FNIP2Q9P278 1114 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TBC1D14Q9P2M4 693 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ANKMY1Q9P2S6 941 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CNOT7Q9UIV1 285 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PCOLCE2Q9UKZ9 415 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CDH7Q9ULB5 785 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 HYOU1Q9Y4L1 999 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PCDHB12Q9Y5F1 795 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SNX14Q9Y5W7 946 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ACTL7BQ9Y614 415 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 NFS1Q9Y697 457 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ABCC6O95255 1503 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ARHGEF10O15013 1369 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 METP08581 1390 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 NWD1Q149M9 1564 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 TRAV6A0A075B6T7 132 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 EFCAB10A6NFE3 127 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZSCAN5BA6NJL1 495 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF839A8K0R7 811 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 LACTBL1A8MY62 500 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 UPK3BL1B0FP48 263 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 BTBD18B2RXH4 712 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 UPK3BL2E5RIL1 263 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GOLGA8SH3BPF8 625 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 STX16-NPEPL1H3BU86 382 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 IFRD1O00458 451 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 VILLO15195 856 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MAPK13O15264 365 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 DENRO43583 198 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GATCO43716 136 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GAS2O43903 313 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CCNT1O60563 726 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 PHF2O75151 1096 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SULT1C4O75897 302 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 LRIG2O94898 1065 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 PSMG1O95456 288 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 BAG2O95816 211 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms