RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 EPN3Q9H201 632 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 POLD4Q9HCU8 107 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 SEPT10Q9P0V9 454 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 LARSQ9P2J5 1176 aaKnown RBP10.03□□□□□ -0.8
YBX3-211ENST00000541351 SATB2Q9UPW6 733 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 DNM3Q9UQ16 869 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 SLC27A6Q9Y2P4 619 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 MYOFQ9NZM1 2061 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 FBN2P35556 2912 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 LRRC72A6NJI9 287 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 TRIM24O15164 1050 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 TRAK2O60296 914 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 MAPTP10636 758 aaKnown RBP10.02□□□□□ -0.81
YBX3-211ENST00000541351 PLS3P13797 630 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 ACO1P21399 889 aaKnown RBP10.02□□□□□ -0.81
YBX3-211ENST00000541351 ACAT1P24752 427 aaKnown RBP10.02□□□□□ -0.81
YBX3-211ENST00000541351 YWHAQP27348 245 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 COPAP53621 1224 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 EVCP57679 992 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 OVGP1Q12889 678 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 CLN3Q13286 438 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 KCNT1Q5JUK3 1230 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 KIAA0895LQ68EN5 471 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 TPGS1Q6ZTW0 290 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 HTR3DQ70Z44 454 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 ANKS1BQ7Z6G8 1248 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 CACUL1Q86Y37 369 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 TOP6BLQ8N6T0 577 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 TMEM161BQ8NDZ6 487 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 TPCN2Q8NHX9 752 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 C8orf48Q96LL4 319 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 JAKMIP1Q96N16 626 aaKnown RBP10.02□□□□□ -0.81
YBX3-211ENST00000541351 TUBD1Q9UJT1 453 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 CDH9Q9ULB4 789 aa10.02□□□□□ -0.81
YBX3-211ENST00000541351 ITPR3Q14573 2671 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 CDRT15L2A8MXV6 281 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 COCHO43405 550 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 LZTS3O60299 673 aaPredicted RBP10.01□□□□□ -0.81
YBX3-211ENST00000541351 AGFG2O95081 481 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 IL18RAPO95256 599 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 IGHDP01880 384 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 BDNFP23560 247 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 CDC25AP30304 524 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 USP46P62068 366 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 CYP27A1Q02318 531 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 ORC2Q13416 577 aaPredicted RBP10.01□□□□□ -0.81
YBX3-211ENST00000541351 MORC3Q14149 939 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 PRAMEF14Q5SWL7 426 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 FAM171BQ6P995 826 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 USP30Q70CQ3 517 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 DPH6Q7L8W6 267 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 CLEC14AQ86T13 490 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 ADGRF2Q8IZF7 708 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 LRRC52Q8N7C0 313 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 WDR36Q8NI36 951 aaKnown RBP10.01□□□□□ -0.81
YBX3-211ENST00000541351 CACTINQ8WUQ7 758 aaKnown RBP10.01□□□□□ -0.81
YBX3-211ENST00000541351 FBXO32Q969P5 355 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 SLC6A18Q96N87 628 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 PKMYT1Q99640 499 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 SYT15Q9BQS2 421 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 NCKIPSDQ9NZQ3 722 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 LRWD1Q9UFC0 647 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 CPSF3Q9UKF6 684 aaKnown RBP10.01□□□□□ -0.81
YBX3-211ENST00000541351 L1RE1Q9UN81 338 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 PLA2G4CQ9UP65 541 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 SLCO1B1Q9Y6L6 691 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 BOD1L1Q8NFC6 3051 aa10.01□□□□□ -0.81
YBX3-211ENST00000541351 ICE1Q9Y2F5 2266 aa10□□□□□ -0.81
YBX3-211ENST00000541351 RELNP78509 3460 aa10□□□□□ -0.81
YBX3-211ENST00000541351 TCHHQ07283 1943 aa10□□□□□ -0.81
YBX3-211ENST00000541351 TLR4O00206 839 aa10□□□□□ -0.81
YBX3-211ENST00000541351 SIGLEC6O43699 453 aa10□□□□□ -0.81
YBX3-211ENST00000541351 ITGA2BP08514 1039 aa10□□□□□ -0.81
YBX3-211ENST00000541351 CISD3P0C7P0 127 aa10□□□□□ -0.81
YBX3-211ENST00000541351 IRF1P10914 325 aa10□□□□□ -0.81
YBX3-211ENST00000541351 CKMT1AP12532 417 aa10□□□□□ -0.81
YBX3-211ENST00000541351 RPS6KB1P23443 525 aa10□□□□□ -0.81
YBX3-211ENST00000541351 GUCY2CP25092 1073 aa10□□□□□ -0.81
YBX3-211ENST00000541351 CHKAP35790 457 aa10□□□□□ -0.81
YBX3-211ENST00000541351 NUDT1P36639 197 aa10□□□□□ -0.81
YBX3-211ENST00000541351 HARS2P49590 506 aaKnown RBP10□□□□□ -0.81
YBX3-211ENST00000541351 OXCT1P55809 520 aa10□□□□□ -0.81
YBX3-211ENST00000541351 CAMK2GQ13555 558 aaPredicted RBP10□□□□□ -0.81
YBX3-211ENST00000541351 ZNF234Q14588 700 aa10□□□□□ -0.81
YBX3-211ENST00000541351 SHBQ15464 509 aa10□□□□□ -0.81
YBX3-211ENST00000541351 ISXQ2M1V0 245 aa10□□□□□ -0.81
YBX3-211ENST00000541351 FHL5Q5TD97 284 aa10□□□□□ -0.81
YBX3-211ENST00000541351 SNX30Q5VWJ9 437 aa10□□□□□ -0.81
YBX3-211ENST00000541351 SLFN12LQ6IEE8 588 aa10□□□□□ -0.81
YBX3-211ENST00000541351 TICAM1Q8IUC6 712 aa10□□□□□ -0.81
YBX3-211ENST00000541351 RASEFQ8IZ41 740 aa10□□□□□ -0.81
YBX3-211ENST00000541351 NUP93Q8N1F7 819 aa10□□□□□ -0.81
YBX3-211ENST00000541351 WDR48Q8TAF3 677 aa10□□□□□ -0.81
YBX3-211ENST00000541351 MAPK15Q8TD08 544 aa10□□□□□ -0.81
YBX3-211ENST00000541351 GANCQ8TET4 914 aa10□□□□□ -0.81
YBX3-211ENST00000541351 MYLPFQ96A32 169 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms