RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 ZNF366Q8N895 744 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FBXO15Q8NCQ5 510 aaPredicted RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 MOSPD2Q8NHP6 518 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 TANKQ92844 425 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 RAB7BQ96AH8 199 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 OPALINQ96PE5 141 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 OSGEPL1Q9H4B0 414 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SP110Q9HB58 689 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 DIABLOQ9NR28 239 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 GGA1Q9UJY5 639 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 TRHDEQ9UKU6 1024 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 VAV3Q9UKW4 847 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ARHGAP26Q9UNA1 814 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 MTMR6Q9Y217 621 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 XDHP47989 1333 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 GSG1L2A8MUP6 293 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 G3V3G9 751 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SMAD6O43541 496 aaKnown RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 NOL3O60936 208 aaKnown RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 IL6P05231 212 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SELLP14151 372 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ITGALP20701 1170 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FGFR4P22455 802 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ATP12AP54707 1039 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ANKRD20A4Q4UJ75 823 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FAM47CQ5HY64 1035 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 DCAF8Q5TAQ9 597 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 RETSATQ6NUM9 610 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 CYB5R4Q7L1T6 521 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 WDR49Q8IV35 697 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 BBS7Q8IWZ6 715 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 NKX2-3Q8TAU0 364 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SLC44A1Q8WWI5 657 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SYN2Q92777 582 aaPredicted RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 CTRCQ99895 268 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SARGQ9BW04 601 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 TMEM60Q9H2L4 133 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.39□□□□□ -1.39
LMO3-225ENST00000541295 TM9SF3Q9HD45 589 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FAM105AQ9NUU6 356 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 TBC1D23Q9NUY8 699 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 TDRKHQ9Y2W6 561 aaKnown RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 IFT52Q9Y366 437 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 MAD1L1Q9Y6D9 718 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ZNF831Q5JPB2 1677 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 NUDT19A8MXV4 375 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 GADD45BO75293 160 aaPredicted RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 CDC123O75794 336 aaPredicted RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 TYRP1P17643 537 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 PDCP20941 246 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CRKP46108 304 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CPT1AP50416 773 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 ANTXR2P58335 489 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 UBE2IP63279 158 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 PIN1Q13526 163 aaPredicted RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 HNRNPDQ14103 355 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 KPNB1Q14974 876 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 TMEM67Q5HYA8 995 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 STXBP5Q5T5C0 1151 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CATSPERGQ6ZRH7 1159 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 TMTC3Q6ZXV5 915 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CCDC36Q8IYA8 594 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 KIAA2013Q8IYS2 634 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 ZNF680Q8NEM1 530 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 LRRC39Q96DD0 335 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 HES6Q96HZ4 224 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 SPACA1Q9HBV2 294 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 OR6C2Q9NZP2 312 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CHORDC1Q9UHD1 332 aaPredicted RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 GPR34Q9UPC5 381 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 ERVK-11Q9UQG0 969 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 RGSL1A5PLK6 1076 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 H3BRJ5 948 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 PSIP1O75475 530 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 PRPF6O94906 941 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 UPP2O95045 317 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CRTAMO95727 393 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 PRG2P13727 222 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 ACADSP16219 412 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 KCNA3P22001 575 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 TCEA1P23193 301 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 ARL1P40616 181 aaPredicted RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 CACNA2D1P54289 1103 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CHRNEQ04844 493 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 AP3B2Q13367 1082 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 PARP6Q2NL67 630 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 FAM102BQ5T8I3 360 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 DENND2CQ68D51 928 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 TMPRSS9Q7Z410 1059 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 ZNF227Q86WZ6 799 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 CDKL3Q8IVW4 592 aaPredicted RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 CLEC4FQ8N1N0 589 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 MINDY2Q8NBR6 621 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 POC1BQ8TC44 478 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 NUP85Q9BW27 656 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 PRKD2Q9BZL6 878 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 MOV10Q9HCE1 1003 aaKnown RBP6.38□□□□□ -1.39
LMO3-225ENST00000541295 CYP26B1Q9NR63 512 aa6.38□□□□□ -1.39
LMO3-225ENST00000541295 C20orf96Q9NUD7 363 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms