RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 SDE2Q6IQ49 451 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 UNQ6494/PRO21346Q6UXR6 183 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 CAPN10Q9HC96 672 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 FBXO10Q9UK96 956 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 SLC6A14Q9UN76 642 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 HMBSP08397 361 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 PSMC2P35998 433 aaKnown RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 ADAM9Q13443 819 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 ZCWPW2Q504Y3 356 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 PIP4P1Q86T03 277 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 GUF1Q8N442 669 aaKnown RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 TRIML1Q8N9V2 468 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 HEXIM2Q96MH2 286 aaKnown RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 GTPBP2Q9BX10 602 aaKnown RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 TMEM121BQ9BXQ6 578 aaPredicted RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 CLIC5Q9NZA1 410 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
TRIM65-203ENST00000540812 RALYQ9UKM9 306 aaKnown RBP17.07■□□□□ 0.32
TRIM65-203ENST00000540812 PCDH15Q96QU1 1955 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 CEP192Q8TEP8 1941 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ADAMTS9Q9P2N4 1935 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 SPAARA0A1B0GVQ0 90 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ZNF217O75362 1048 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 SERPINF2P08697 491 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 RALAP11233 206 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 PSEN1P49768 467 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 KRT85P78386 507 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ENPEPQ07075 957 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 EFEMP1Q12805 493 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 SEMA3BQ13214 749 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 FYB2Q5VWT5 728 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 KRBA2Q6ZNG9 492 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 TADA2BQ86TJ2 420 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 OR2I1PQ8NGU4 316 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 CEP76Q8TAP6 659 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 MRGPRX1Q96LB2 322 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 HSPA12BQ96MM6 686 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ARID3AQ99856 593 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 SCNM1Q9BWG6 230 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 ADAM33Q9BZ11 813 aa17.06■□□□□ 0.32
TRIM65-203ENST00000540812 PENKP01210 267 aaPredicted RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 RPL13P26373 211 aaKnown RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 CORO1AP31146 461 aaKnown RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 GTF2H1P32780 548 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 ATXN3P54252 364 aaPredicted RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 MFAP3P55082 362 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 MCCD1P59942 119 aaPredicted RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 GEN1Q17RS7 908 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 KRT39Q6A163 491 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 KIAA1324Q6UXG2 1013 aaKnown RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 SMYD4Q8IYR2 804 aaPredicted RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 SLC4A11Q8NBS3 891 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 CCDC150Q8NCX0 1101 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 TATDN2Q93075 761 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 ZNF419Q96HQ0 510 aaPredicted RBP17.05■□□□□ 0.32
TRIM65-203ENST00000540812 SLC32A1Q9H598 525 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 CISHQ9NSE2 258 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 CLEC4EQ9ULY5 219 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 STON1Q9Y6Q2 735 aa17.05■□□□□ 0.32
TRIM65-203ENST00000540812 GFRA2O00451 464 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 HYAL3O43820 417 aaPredicted RBP17.04■□□□□ 0.32
TRIM65-203ENST00000540812 IL12RB1P42701 662 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 MXI1P50539 228 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 RAD23BP54727 409 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 FAM193AP78312 1265 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 FUT11Q495W5 492 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 PIGZQ86VD9 579 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 HDDC3Q8N4P3 179 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 MINDY1Q8N5J2 469 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 KDF1Q8NAX2 398 aaPredicted RBP17.04■□□□□ 0.32
TRIM65-203ENST00000540812 NDRG1Q92597 394 aaKnown RBP17.04■□□□□ 0.32
TRIM65-203ENST00000540812 GATA6Q92908 595 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 TMEM176AQ96HP8 235 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 CDK5RAP1Q96SZ6 601 aaKnown RBP17.04■□□□□ 0.32
TRIM65-203ENST00000540812 AGO1Q9UL18 857 aaKnown RBP17.04■□□□□ 0.32
TRIM65-203ENST00000540812 ZMIZ1Q9ULJ6 1067 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 ZNF510Q9Y2H8 683 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 SLC27A6Q9Y2P4 619 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 LAMA5O15230 3695 aa17.04■□□□□ 0.32
TRIM65-203ENST00000540812 UPK3BL1B0FP48 263 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 UPK3BL2E5RIL1 263 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 ARHGAP33O14559 1287 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 OPHN1O60890 802 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 SIM1P81133 766 aaPredicted RBP17.03■□□□□ 0.32
TRIM65-203ENST00000540812 COG7P83436 770 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 RAB41Q5JT25 222 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 RABEPKQ7Z6M1 372 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 DENND1CQ8IV53 801 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 PIWIL1Q96J94 861 aaKnown RBP17.03■□□□□ 0.32
TRIM65-203ENST00000540812 DCLK3Q9C098 648 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 MKRN2Q9H000 416 aaKnown RBP17.03■□□□□ 0.32
TRIM65-203ENST00000540812 RAB20Q9NX57 234 aa17.03■□□□□ 0.32
TRIM65-203ENST00000540812 MARCH2Q9P0N8 246 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms